RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 RANP62826 216 aaKnown RBP17.69■□□□□ 0.42
CDC42EP4-205ENST00000580315 KIR3DS1Q14943 382 aa17.69■□□□□ 0.42
CDC42EP4-205ENST00000580315 TMEM78Q5T7P6 136 aa17.69■□□□□ 0.42
CDC42EP4-205ENST00000580315 ZNF493Q6ZR52 646 aa17.69■□□□□ 0.42
CDC42EP4-205ENST00000580315 OR10G4Q8NGN3 311 aa17.69■□□□□ 0.42
CDC42EP4-205ENST00000580315 OR10G9Q8NGN4 311 aa17.69■□□□□ 0.42
CDC42EP4-205ENST00000580315 OR10G7Q8NGN6 311 aa17.69■□□□□ 0.42
CDC42EP4-205ENST00000580315 PSMG3Q9BT73 122 aaPredicted RBP17.69■□□□□ 0.42
CDC42EP4-205ENST00000580315 SLC25A5P05141 298 aaKnown RBP17.68■□□□□ 0.42
CDC42EP4-205ENST00000580315 PQLC2Q6ZP29 291 aa17.68■□□□□ 0.42
CDC42EP4-205ENST00000580315 C9orf47Q6ZRZ4 202 aa17.68■□□□□ 0.42
CDC42EP4-205ENST00000580315 CCDC28AQ8IWP9 274 aa17.68■□□□□ 0.42
CDC42EP4-205ENST00000580315 OR2G3Q8NGZ4 309 aa17.68■□□□□ 0.42
CDC42EP4-205ENST00000580315 AGPAT4-IT1Q9H0P7 198 aa17.68■□□□□ 0.42
CDC42EP4-205ENST00000580315 TNFSF18Q9UNG2 199 aa17.68■□□□□ 0.42
CDC42EP4-205ENST00000580315 IGKV2-40A0A087WW87 121 aaPredicted RBP17.67■□□□□ 0.42
CDC42EP4-205ENST00000580315 IGKV2D-40P01614 121 aaPredicted RBP17.67■□□□□ 0.42
CDC42EP4-205ENST00000580315 Q9H3A6 140 aa17.67■□□□□ 0.42
CDC42EP4-205ENST00000580315 PLA2G2EQ9NZK7 142 aa17.67■□□□□ 0.42
CDC42EP4-205ENST00000580315 BORCS7-ASMTA0A0B4J1R7 106 aa17.66■□□□□ 0.42
CDC42EP4-205ENST00000580315 TRAV12-3A0A0B4J271 114 aa17.66■□□□□ 0.42
CDC42EP4-205ENST00000580315 RNF222A6NCQ9 220 aa17.66■□□□□ 0.42
CDC42EP4-205ENST00000580315 MBP02144 154 aa17.66■□□□□ 0.42
CDC42EP4-205ENST00000580315 ATP6V0CP27449 155 aa17.66■□□□□ 0.42
CDC42EP4-205ENST00000580315 TMEM263Q8WUH6 116 aaKnown RBP17.66■□□□□ 0.42
CDC42EP4-205ENST00000580315 NDUFAF3Q9BU61 184 aa17.66■□□□□ 0.42
CDC42EP4-205ENST00000580315 HTN3P15516 51 aa17.65■□□□□ 0.42
CDC42EP4-205ENST00000580315 SERF2P84101 59 aa17.65■□□□□ 0.42
CDC42EP4-205ENST00000580315 RXFP4Q8TDU9 374 aa17.65■□□□□ 0.42
CDC42EP4-205ENST00000580315 FAM210BQ96KR6 192 aa17.65■□□□□ 0.42
CDC42EP4-205ENST00000580315 TIMM8BQ9Y5J9 83 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP4-205ENST00000580315 PLAC8L1A1L4L8 177 aa17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 C7orf71A4D174 169 aa17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 EIF3GO75821 320 aaKnown RBP eCLIP17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 NMBP08949 121 aa17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 CDC34P49427 236 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 FAM74A1Q5RGS3 127 aa17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 GNPNAT1Q96EK6 184 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 FAM19A4Q96LR4 140 aa17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 VGLL1Q99990 258 aa17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 PYGO2Q9BRQ0 406 aa17.64■□□□□ 0.41
CDC42EP4-205ENST00000580315 DNAH6Q9C0G6 4158 aa17.63■□□□□ 0.41
CDC42EP4-205ENST00000580315 KLLNB2CW77 178 aa17.63■□□□□ 0.41
CDC42EP4-205ENST00000580315 GPX1P07203 203 aa17.63■□□□□ 0.41
CDC42EP4-205ENST00000580315 DEFB130BP0DP73 79 aa17.63■□□□□ 0.41
CDC42EP4-205ENST00000580315 DEFB130AP0DP74 79 aa17.63■□□□□ 0.41
CDC42EP4-205ENST00000580315 RNASE8Q8TDE3 154 aaKnown RBP17.63■□□□□ 0.41
CDC42EP4-205ENST00000580315 OTORQ9NRC9 128 aa17.63■□□□□ 0.41
CDC42EP4-205ENST00000580315 RBAKDNA6NC62 111 aa17.62■□□□□ 0.41
CDC42EP4-205ENST00000580315 CRISP2P16562 243 aa17.62■□□□□ 0.41
CDC42EP4-205ENST00000580315 ZNF138P52744 262 aa17.62■□□□□ 0.41
CDC42EP4-205ENST00000580315 RPL7L1Q6DKI1 246 aaKnown RBP17.62■□□□□ 0.41
CDC42EP4-205ENST00000580315 CMTM2Q8TAZ6 248 aa17.62■□□□□ 0.41
CDC42EP4-205ENST00000580315 ZNF492Q9P255 531 aa17.62■□□□□ 0.41
CDC42EP4-205ENST00000580315 HMGB3O15347 200 aaKnown RBP17.61■□□□□ 0.41
CDC42EP4-205ENST00000580315 RNASE4P34096 147 aaKnown RBP17.61■□□□□ 0.41
CDC42EP4-205ENST00000580315 HYLS1Q96M11 299 aa17.61■□□□□ 0.41
CDC42EP4-205ENST00000580315 SH3BGRL3Q9H299 93 aa17.61■□□□□ 0.41
CDC42EP4-205ENST00000580315 TRBV7-9A0A0J9YWB2 115 aa17.6■□□□□ 0.41
CDC42EP4-205ENST00000580315 ARPC5O15511 151 aa17.6■□□□□ 0.41
CDC42EP4-205ENST00000580315 BTN1A1Q13410 526 aa17.6■□□□□ 0.41
CDC42EP4-205ENST00000580315 NOP10Q9NPE3 64 aaKnown RBP17.6■□□□□ 0.41
CDC42EP4-205ENST00000580315 PGPA6NDG6 321 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 SNURFLB1AK76 121 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 DIRC3C9JPN6 131 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 G3V3Q6 166 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 TAAR5O14804 337 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 STAG3L2P0CL84 134 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 STAG3L3P0CL85 134 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 ARL14EPLP0DKL9 152 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 CD300CQ08708 224 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 RAB24Q969Q5 203 aa17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 ACTR3CQ9C0K3 210 aaPredicted RBP17.59■□□□□ 0.41
CDC42EP4-205ENST00000580315 ZFAND2AQ8N6M9 145 aa17.58■□□□□ 0.4
CDC42EP4-205ENST00000580315 CBY3A6NI87 242 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 ZNF324O75467 553 aaPredicted RBP17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 ATP5G1P05496 136 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 P0DMU3 169 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 FAM231AP0DMU4 169 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 FAM231CP0DMU5 169 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 ATP5G3P48201 142 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 ARL6IP6Q8N6S5 226 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 ZNF680Q8NEM1 530 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 Q8TAT8 98 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 LINC00467Q9BRT7 94 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 RYR1P21817 5038 aa17.57■□□□□ 0.4
CDC42EP4-205ENST00000580315 EIF4E3Q8N5X7 224 aaKnown RBP17.56■□□□□ 0.4
CDC42EP4-205ENST00000580315 RPH3ALQ9UNE2 315 aa17.56■□□□□ 0.4
CDC42EP4-205ENST00000580315 SMLR1H3BR10 107 aa17.55■□□□□ 0.4
CDC42EP4-205ENST00000580315 CXorf1O96002 111 aa17.55■□□□□ 0.4
CDC42EP4-205ENST00000580315 LENEPQ9Y5L5 61 aa17.55■□□□□ 0.4
CDC42EP4-205ENST00000580315 RGS13O14921 159 aa17.54■□□□□ 0.4
CDC42EP4-205ENST00000580315 GCHFRP30047 84 aa17.54■□□□□ 0.4
CDC42EP4-205ENST00000580315 TMEM88Q6PEY1 159 aa17.54■□□□□ 0.4
CDC42EP4-205ENST00000580315 LINC00336Q6ZUF6 198 aa17.54■□□□□ 0.4
CDC42EP4-205ENST00000580315 TMED6Q8WW62 240 aa17.54■□□□□ 0.4
CDC42EP4-205ENST00000580315 TMEM167BQ9NRX6 74 aa17.54■□□□□ 0.4
CDC42EP4-205ENST00000580315 F5H768 121 aa17.53■□□□□ 0.4
CDC42EP4-205ENST00000580315 ANXA2RQ3ZCQ2 193 aa17.53■□□□□ 0.4
CDC42EP4-205ENST00000580315 PRR9Q5T870 116 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms