RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 NOL3O60936 208 aaKnown RBP7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 GPX1P07203 203 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 SRIP30626 198 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 RNASE4P34096 147 aaKnown RBP7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 CAMLGP49069 296 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 TMBIM6P55061 237 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 BTN1A1Q13410 526 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 OR1L4Q8NGR5 311 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 PCNPQ8WW12 178 aaKnown RBP7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 LINC00477Q96M19 166 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 C8orf49Q96NF6 230 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 PFDN5Q99471 154 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 ARPC5LQ9BPX5 153 aa7.89□□□□□ -1.15
CTDNEP1-212ENST00000576613 IGLV5-52A0A0A0MRZ9 124 aa7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 PRAF2O60831 178 aa7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 NMBP08949 121 aa7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 CD300CQ08708 224 aa7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 IAH1Q2TAA2 248 aaPredicted RBP7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 WFDC10BQ8IUB3 73 aa7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 C10orf126Q8N4M7 172 aa7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 C12orf45Q8N5I9 185 aaPredicted RBP7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 NTN5Q8WTR8 489 aaPredicted RBP7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 MRPL16Q9NX20 251 aaKnown RBP7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 PRELID1Q9Y255 219 aa7.88□□□□□ -1.15
CTDNEP1-212ENST00000576613 TRBV19A0A075B6N1 114 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 TRAV5A0A0B4J249 113 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 TRGV4A0A0C4DH28 118 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 M0R3E3 92 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 PSCAO43653 123 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 CRYGDP07320 174 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 CRISP2P16562 243 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 HAMPP81172 84 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 ZNF415Q09FC8 603 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 ARL16Q0P5N6 197 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 ERCC8Q13216 396 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 FHL2Q14192 279 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 NRARPQ7Z6K4 114 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 FAM19A4Q96LR4 140 aa7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 MRPL32Q9BYC8 188 aaKnown RBP7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 RCL1Q9Y2P8 373 aaKnown RBP7.87□□□□□ -1.15
CTDNEP1-212ENST00000576613 IGHV1OR15-1A0A075B7D0 117 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 C7orf66A4D0T2 115 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 E5RGE8 158 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 K7EQD1 137 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 L7N2F9 121 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 ORM1P02763 201 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 HIST1H1EP10412 219 aaKnown RBP7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 VAMP2P63027 116 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 PDE6HQ13956 83 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 TMEM78Q5T7P6 136 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 C9orf47Q6ZRZ4 202 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 TXNDC17Q9BRA2 123 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 SRRQ9GZT4 340 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 AGPAT4-IT1Q9H0P7 198 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 AAMDCQ9H7C9 122 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 GSKIPQ9P0R6 139 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 TP53TG3Q9ULZ0 132 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 TIMM9Q9Y5J7 89 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 V9GYH0 126 aa7.86□□□□□ -1.15
CTDNEP1-212ENST00000576613 H3BMQ9 156 aa7.85□□□□□ -1.15
CTDNEP1-212ENST00000576613 NDUFB6O95139 128 aa7.85□□□□□ -1.15
CTDNEP1-212ENST00000576613 S100A5P33763 92 aa7.85□□□□□ -1.15
CTDNEP1-212ENST00000576613 INPP1P49441 399 aa7.85□□□□□ -1.15
CTDNEP1-212ENST00000576613 MIC13Q5XKP0 118 aa7.85□□□□□ -1.15
CTDNEP1-212ENST00000576613 UQCC1Q9NVA1 299 aa7.85□□□□□ -1.15
CTDNEP1-212ENST00000576613 TMEM14CQ9P0S9 112 aa7.85□□□□□ -1.15
CTDNEP1-212ENST00000576613 NAP1L6A6NFF2 107 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 C9JCJ5 164 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 NDUFB4O95168 129 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 MBPP02686 304 aaPredicted RBP7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 GYPEP15421 78 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 BCAP31P51572 246 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 IQCF2Q8IXL9 164 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 ZFAND2AQ8N6M9 145 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 C20orf85Q9H1P6 137 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 SLC39A9Q9NUM3 307 aa7.84□□□□□ -1.15
CTDNEP1-212ENST00000576613 IGKV2-40A0A087WW87 121 aaPredicted RBP7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 IGKV2D-40P01614 121 aaPredicted RBP7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 PLA2G1BP04054 148 aaKnown RBP7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 RPL29P47914 159 aaKnown RBP7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 CAV2P51636 162 aa7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 ZNF846Q147U1 533 aa7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 PRR9Q5T870 116 aa7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 EXOC3-AS1Q8N2X6 119 aa7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 OR10G4Q8NGN3 311 aa7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 BLNKQ8WV28 456 aa7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 FLVCR2Q9UPI3 526 aa7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 WDR83OSQ9Y284 106 aa7.83□□□□□ -1.16
CTDNEP1-212ENST00000576613 TRBV7-9A0A0J9YWB2 115 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 UBE2L5PA0A1B0GUS4 154 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 LRCOL1A6NCL2 159 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 CST7O76096 145 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 SFTA3P0C7M3 94 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 PYYP10082 97 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 BAXQ07812 192 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 TRIQKQ629K1 86 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 FAM122CQ6P4D5 195 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 SH2D6Q7Z4S9 175 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 Q8N814 137 aa7.82□□□□□ -1.16
CTDNEP1-212ENST00000576613 MITD1Q8WV92 249 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms