RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 PQLC2Q6ZP29 291 aa14.77□□□□□ -0.05
CHMP6-204ENST00000572778 LINC00476Q8WZB0 136 aa14.77□□□□□ -0.05
CHMP6-204ENST00000572778 GNPNAT1Q96EK6 184 aaPredicted RBP14.77□□□□□ -0.05
CHMP6-204ENST00000572778 C20orf144Q9BQM9 153 aa14.77□□□□□ -0.05
CHMP6-204ENST00000572778 NIPSNAP3BQ9BS92 247 aa14.77□□□□□ -0.05
CHMP6-204ENST00000572778 LYSTQ99698 3801 aa14.76□□□□□ -0.05
CHMP6-204ENST00000572778 TRAV12-3A0A0B4J271 114 aa14.76□□□□□ -0.05
CHMP6-204ENST00000572778 TMEM78Q5T7P6 136 aa14.76□□□□□ -0.05
CHMP6-204ENST00000572778 C9orf47Q6ZRZ4 202 aa14.76□□□□□ -0.05
CHMP6-204ENST00000572778 VGLL1Q99990 258 aa14.76□□□□□ -0.05
CHMP6-204ENST00000572778 RAB24Q969Q5 203 aa14.75□□□□□ -0.05
CHMP6-204ENST00000572778 HYLS1Q96M11 299 aa14.75□□□□□ -0.05
CHMP6-204ENST00000572778 SLC25A5P05141 298 aaKnown RBP14.74□□□□□ -0.05
CHMP6-204ENST00000572778 DAD1P61803 113 aa14.74□□□□□ -0.05
CHMP6-204ENST00000572778 OTORQ9NRC9 128 aa14.74□□□□□ -0.05
CHMP6-204ENST00000572778 RYR2Q92736 4967 aa14.74□□□□□ -0.05
CHMP6-204ENST00000572778 PGPA6NDG6 321 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 TAAR5O14804 337 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 STAG3L2P0CL84 134 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 STAG3L3P0CL85 134 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 ARL14EPLP0DKL9 152 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 TCTAP57738 103 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 FAM74A1Q5RGS3 127 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 CCDC28AQ8IWP9 274 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 RXFP4Q8TDU9 374 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 C16orf74Q96GX8 76 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 FAM19A4Q96LR4 140 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 ACTR3CQ9C0K3 210 aaPredicted RBP14.73□□□□□ -0.05
CHMP6-204ENST00000572778 ALMS1Q8TCU4 4167 aa14.73□□□□□ -0.05
CHMP6-204ENST00000572778 C7orf71A4D174 169 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 LYRM9A8MSI8 78 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 GPX1P07203 203 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 HTN3P15516 51 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 RNASE4P34096 147 aaKnown RBP14.72□□□□□ -0.05
CHMP6-204ENST00000572778 ZNF138P52744 262 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 ZNF493Q6ZR52 646 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 CMTM2Q8TAZ6 248 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 ZNF492Q9P255 531 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 APLNQ9ULZ1 77 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 RPH3ALQ9UNE2 315 aa14.72□□□□□ -0.05
CHMP6-204ENST00000572778 DNAH1Q9P2D7 4330 aa14.71□□□□□ -0.05
CHMP6-204ENST00000572778 IGHV4-4A0A075B6R2 117 aa14.71□□□□□ -0.05
CHMP6-204ENST00000572778 PLAC8L1A1L4L8 177 aa14.71□□□□□ -0.05
CHMP6-204ENST00000572778 BTN1A1Q13410 526 aa14.71□□□□□ -0.05
CHMP6-204ENST00000572778 Q8TAT8 98 aa14.71□□□□□ -0.05
CHMP6-204ENST00000572778 TMEM263Q8WUH6 116 aaKnown RBP14.71□□□□□ -0.05
CHMP6-204ENST00000572778 CYTL1Q9NRR1 136 aa14.71□□□□□ -0.05
CHMP6-204ENST00000572778 KLLNB2CW77 178 aa14.7□□□□□ -0.06
CHMP6-204ENST00000572778 DIRC3C9JPN6 131 aa14.7□□□□□ -0.06
CHMP6-204ENST00000572778 DEFB130BP0DP73 79 aa14.7□□□□□ -0.06
CHMP6-204ENST00000572778 DEFB130AP0DP74 79 aa14.7□□□□□ -0.06
CHMP6-204ENST00000572778 CRISP2P16562 243 aa14.7□□□□□ -0.06
CHMP6-204ENST00000572778 GCHFRP30047 84 aa14.7□□□□□ -0.06
CHMP6-204ENST00000572778 CD300CQ08708 224 aa14.7□□□□□ -0.06
CHMP6-204ENST00000572778 OR11H4Q8NGC9 324 aa14.7□□□□□ -0.06
CHMP6-204ENST00000572778 RNASE8Q8TDE3 154 aaKnown RBP14.7□□□□□ -0.06
CHMP6-204ENST00000572778 RBAKDNA6NC62 111 aa14.69□□□□□ -0.06
CHMP6-204ENST00000572778 NMBP08949 121 aa14.69□□□□□ -0.06
CHMP6-204ENST00000572778 IQCF2Q8IXL9 164 aa14.69□□□□□ -0.06
CHMP6-204ENST00000572778 KCNRGQ8N5I3 272 aa14.69□□□□□ -0.06
CHMP6-204ENST00000572778 ZFAND2AQ8N6M9 145 aa14.69□□□□□ -0.06
CHMP6-204ENST00000572778 PYGO2Q9BRQ0 406 aa14.69□□□□□ -0.06
CHMP6-204ENST00000572778 TIMM8BQ9Y5J9 83 aaPredicted RBP14.69□□□□□ -0.06
CHMP6-204ENST00000572778 CXorf1O96002 111 aa14.68□□□□□ -0.06
CHMP6-204ENST00000572778 AKR1C8PQ5T2L2 129 aa14.68□□□□□ -0.06
CHMP6-204ENST00000572778 LGALS9CQ6DKI2 356 aa14.68□□□□□ -0.06
CHMP6-204ENST00000572778 SSX7Q7RTT5 188 aa14.68□□□□□ -0.06
CHMP6-204ENST00000572778 ARPC5LQ9BPX5 153 aa14.68□□□□□ -0.06
CHMP6-204ENST00000572778 NOP10Q9NPE3 64 aaKnown RBP14.68□□□□□ -0.06
CHMP6-204ENST00000572778 HMSDA8MTL9 139 aa14.67□□□□□ -0.06
CHMP6-204ENST00000572778 ZNF324O75467 553 aaPredicted RBP14.67□□□□□ -0.06
CHMP6-204ENST00000572778 ZNF345Q14585 488 aa14.67□□□□□ -0.06
CHMP6-204ENST00000572778 PRR9Q5T870 116 aa14.67□□□□□ -0.06
CHMP6-204ENST00000572778 TMEM167BQ9NRX6 74 aa14.67□□□□□ -0.06
CHMP6-204ENST00000572778 SNURFLB1AK76 121 aa14.66□□□□□ -0.06
CHMP6-204ENST00000572778 GOLT1AQ6ZVE7 132 aa14.66□□□□□ -0.06
CHMP6-204ENST00000572778 NDUFAF3Q9BU61 184 aa14.66□□□□□ -0.06
CHMP6-204ENST00000572778 A0A0D9SG52 128 aa14.65□□□□□ -0.06
CHMP6-204ENST00000572778 TRBV7-9A0A0J9YWB2 115 aa14.65□□□□□ -0.06
CHMP6-204ENST00000572778 CTXND1A0A1B0GTU2 59 aa14.65□□□□□ -0.06
CHMP6-204ENST00000572778 GNG5P63218 68 aa14.65□□□□□ -0.06
CHMP6-204ENST00000572778 ZNF726P1Q15940 193 aa14.65□□□□□ -0.06
CHMP6-204ENST00000572778 ARL6IP6Q8N6S5 226 aa14.65□□□□□ -0.06
CHMP6-204ENST00000572778 SUN5Q8TC36 379 aa14.65□□□□□ -0.06
CHMP6-204ENST00000572778 ST6GAL2Q96JF0 529 aa14.65□□□□□ -0.06
CHMP6-204ENST00000572778 CBY3A6NI87 242 aa14.64□□□□□ -0.07
CHMP6-204ENST00000572778 Q6ZQT7 251 aa14.64□□□□□ -0.07
CHMP6-204ENST00000572778 EIF4E3Q8N5X7 224 aaKnown RBP14.64□□□□□ -0.07
CHMP6-204ENST00000572778 KANTRA0A1W2PQU2 76 aa14.63□□□□□ -0.07
CHMP6-204ENST00000572778 RGS13O14921 159 aa14.63□□□□□ -0.07
CHMP6-204ENST00000572778 SUMO1P63165 101 aaKnown RBP14.63□□□□□ -0.07
CHMP6-204ENST00000572778 FAM210BQ96KR6 192 aa14.63□□□□□ -0.07
CHMP6-204ENST00000572778 LINC00467Q9BRT7 94 aa14.63□□□□□ -0.07
CHMP6-204ENST00000572778 ZNF471Q9BX82 626 aaPredicted RBP14.63□□□□□ -0.07
CHMP6-204ENST00000572778 LENEPQ9Y5L5 61 aa14.63□□□□□ -0.07
CHMP6-204ENST00000572778 IGHV1OR15-1A0A075B7D0 117 aa14.62□□□□□ -0.07
CHMP6-204ENST00000572778 TRAV8-1A0A0A6YYK1 113 aa14.62□□□□□ -0.07
CHMP6-204ENST00000572778 BCL2L11O43521 198 aa14.62□□□□□ -0.07
CHMP6-204ENST00000572778 C5orf17Q8NAS9 161 aa14.62□□□□□ -0.07
CHMP6-204ENST00000572778 ZNF680Q8NEM1 530 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms