RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 SNAPINO95295 136 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 IGLL1P15814 213 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 CENPWQ5EE01 88 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 COX8CQ7Z4L0 72 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 PRNTQ86SH4 94 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 TMEM183AQ8IXX5 376 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 AGPAT4-IT1Q9H0P7 198 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 SDF2L1Q9HCN8 221 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 ZNF492Q9P255 531 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 SELENOKQ9Y6D0 94 aa8.89□□□□□ -0.99
CDRT1-206ENST00000571263 SETD2Q9BYW2 2564 aaPredicted RBP8.89□□□□□ -0.99
CDRT1-206ENST00000571263 IGKV2-40A0A087WW87 121 aaPredicted RBP8.88□□□□□ -0.99
CDRT1-206ENST00000571263 IGKV2D-40P01614 121 aaPredicted RBP8.88□□□□□ -0.99
CDRT1-206ENST00000571263 IGLV2-11P01706 119 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 HLA-DRB4P13762 266 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 TSPOP30536 169 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 HIST1H1AQ02539 215 aaPredicted RBP8.88□□□□□ -0.99
CDRT1-206ENST00000571263 Q86TA4 180 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 FAM24BQ8N5W8 94 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 IGF2BP2-AS1Q96M15 143 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 LINC00479Q96M42 142 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 PRR25Q96S07 402 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 DERL1Q9BUN8 251 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 HLA-DRB4X5D2U9 266 aa8.88□□□□□ -0.99
CDRT1-206ENST00000571263 TRAV34A0A0B4J273 112 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 APOC3P02656 99 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 CT45A10P0DMU9 189 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 ADCYAP1P18509 176 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 LEPP41159 167 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 NUTF2P61970 127 aaKnown RBP8.87□□□□□ -0.99
CDRT1-206ENST00000571263 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 SMUG1Q53HV7 270 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 OCC1Q8TAD7 63 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 VGLL1Q99990 258 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
CDRT1-206ENST00000571263 TRBV20OR9-2A0A075B6H5 130 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 TRAV8-1A0A0A6YYK1 113 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 A8MTW9 85 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 PPP1R2P9O14990 202 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 GCGP01275 180 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 AMBPP02760 352 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 CRISP2P16562 243 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 RPL23P62829 140 aaKnown RBP8.86□□□□□ -0.99
CDRT1-206ENST00000571263 EGFEM1PQ0D2K5 195 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 LINC01551Q86U37 167 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 STHQ8IWL8 128 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 ASCL2Q99929 193 aa8.86□□□□□ -0.99
CDRT1-206ENST00000571263 H3BMM0 161 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 M0R036 132 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 MT-ND4LP03901 98 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 MGST1P10620 155 aaKnown RBP8.85□□□□□ -0.99
CDRT1-206ENST00000571263 ERCC8Q13216 396 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 RHEBQ15382 184 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 ADIRFQ15847 76 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 ACTL10Q5JWF8 245 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 FAM231DQ6ZW35 169 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 OR4B1Q8NGF8 309 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 ANAPC16Q96DE5 110 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 DAZAP1Q96EP5 407 aaKnown RBP8.85□□□□□ -0.99
CDRT1-206ENST00000571263 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 SGK494Q96LW2 274 aa8.85□□□□□ -0.99
CDRT1-206ENST00000571263 FABP5P3A8MUU1 101 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 F6UB75 175 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 IGLV2-8P01709 118 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 GPX1P07203 203 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 CD7P09564 240 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 MORN3Q6PF18 240 aaPredicted RBP8.84□□□□□ -0.99
CDRT1-206ENST00000571263 APRG1Q8IVJ8 170 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 C15orf54Q8N8G6 183 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 CLRN3Q8NCR9 226 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 CTDSP1Q9GZU7 261 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 C19orf73Q9NVV2 129 aa8.84□□□□□ -0.99
CDRT1-206ENST00000571263 ZNF705DP0CH99 300 aaPredicted RBP8.83□□□□□ -1
CDRT1-206ENST00000571263 ZNF705BP0CI00 300 aaPredicted RBP8.83□□□□□ -1
CDRT1-206ENST00000571263 CDKN1BP46527 198 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 OXLD1Q5BKU9 147 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 FAM162BQ5T6X4 162 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 GDF5OSQ5U4N7 250 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 ISOC2Q96AB3 205 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 C20orf144Q9BQM9 153 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 C1QTNF4Q9BXJ3 329 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 OSTCQ9NRP0 149 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 TMEM242Q9NWH2 141 aa8.83□□□□□ -1
CDRT1-206ENST00000571263 ATRQ13535 2644 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 A0A087WWC5 75 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 TRAV21A0A0B4J279 112 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 KNCNA6PVL3 124 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 KLLNB2CW77 178 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 ERVFC1-1P60608 527 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
CDRT1-206ENST00000571263 SAMD5Q5TGI4 173 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 TRPT1Q86TN4 253 aaKnown RBP8.82□□□□□ -1
CDRT1-206ENST00000571263 Q8TAT8 98 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 SFRP2Q96HF1 295 aa8.82□□□□□ -1
CDRT1-206ENST00000571263 FBN1P35555 2871 aaKnown RBP8.82□□□□□ -1
CDRT1-206ENST00000571263 XKRY2A2RUG3 117 aa8.81□□□□□ -1
CDRT1-206ENST00000571263 PGPEP1LA6NFU8 196 aa8.81□□□□□ -1
CDRT1-206ENST00000571263 P01737 135 aa8.81□□□□□ -1
CDRT1-206ENST00000571263 PFN1P07737 140 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms