RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 VSIRQ9H7M9 311 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 SLC25A22Q9H936 323 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 TMEM167BQ9NRX6 74 aa5.31□□□□□ -1.56
CNOT1-222ENST00000570139 FLNAP21333 2647 aaKnown RBP5.3□□□□□ -1.56
CNOT1-222ENST00000570139 TNCP24821 2201 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 OTOGQ6ZRI0 2925 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 A0A1B0GUS0 222 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 PSMB11A5LHX3 300 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 G3V318 75 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 IGKV1-17P01599 117 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 TRGV3P03979 118 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 CD5P06127 495 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 BCL2P10415 239 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 TPPP2P59282 170 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 HILS1P60008 231 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 BLCAPP62952 87 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF726P1Q15940 193 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 LCN15Q6UWW0 184 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 MRPL36Q9P0J6 103 aaKnown RBP5.3□□□□□ -1.56
CNOT1-222ENST00000570139 VAX2Q9UIW0 290 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 HIGD1AQ9Y241 93 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 SOX21Q9Y651 276 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-222ENST00000570139 ZANQ9Y493 2812 aa5.3□□□□□ -1.56
CNOT1-222ENST00000570139 NAV3Q8IVL0 2385 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.29□□□□□ -1.56
CNOT1-222ENST00000570139 WI2-2373I1.2A0A1W2PRP0 233 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 TMEM218A2RU14 115 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 F6UZH7 168 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 TMEM250H0YL14 139 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 TGOLN2O43493 480 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 PDE6DO43924 150 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 IL4P05112 153 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 CRYBA1P05813 215 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 CTSGP08311 255 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 ARL14EPLP0DKL9 152 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 PSMB8P28062 276 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 BMI1P35226 326 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 MEF2BQ02080 365 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF90Q03938 601 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 LINC00305Q7Z4B0 112 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 NARS2Q96I59 477 aaKnown RBP5.29□□□□□ -1.56
CNOT1-222ENST00000570139 GPR82Q96P67 336 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 SEC11CQ9BY50 192 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 SLC35B3Q9H1N7 401 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF702PQ9H963 129 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 TREM1Q9NP99 234 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 TMEM14CQ9P0S9 112 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 GNG13Q9P2W3 67 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 RFNGQ9Y644 331 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 CELSR1Q9NYQ6 3014 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 MXRA5Q9NR99 2828 aa5.29□□□□□ -1.56
CNOT1-222ENST00000570139 IGHV3-21A0A0B4J1V1 117 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 A0A1B0GWB2 263 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 A0A1W2PRE2 83 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 OR2T8A6NH00 312 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 RPL37AP8A6NKH3 93 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 NDUFA4O00483 81 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 SOCS3O14543 225 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 OR7C2O60412 319 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 LY6G6DO95868 133 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 IGHV3-48P01763 117 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 SFTA3P0C7M3 94 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 ORM2P19652 201 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 GCHFRP30047 84 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 MEOX2P50222 304 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 LYZP61626 148 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 OR5I1Q13606 314 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 GCSAMLQ5JQS6 135 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 ZNF343Q6P1L6 599 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 SSX7Q7RTT5 188 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 BPIFA4PQ86YQ2 179 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 IQCF2Q8IXL9 164 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 MYOZ3Q8TDC0 251 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 RPUSD4Q96CM3 377 aaKnown RBP5.28□□□□□ -1.56
CNOT1-222ENST00000570139 UBE2E2Q96LR5 201 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 MRPL27Q9P0M9 148 aaKnown RBP5.28□□□□□ -1.56
CNOT1-222ENST00000570139 RABAC1Q9UI14 185 aa5.28□□□□□ -1.56
CNOT1-222ENST00000570139 F8W036 122 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 H3BRN7 92 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 TCF21O43680 179 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 GGCTO75223 188 aaKnown RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 GATA1P15976 413 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 RPL7P18124 248 aaKnown RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 GATA2P23769 480 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 FGF8P55075 233 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 UBE2L3P68036 154 aaKnown RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 PDE6HQ13956 83 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 C10orf91Q5T1B1 145 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 C1orf194Q5T5A4 169 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 CLEC19AQ6UXS0 136 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 PATE2Q6UY27 113 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 MIR17HGQ75NE6 70 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 SVBPQ8N300 66 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 OR4X2Q8NGF9 303 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 NOL4LQ96MY1 436 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 SHANK2-AS3Q9BTD1 123 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 PAXXQ9BUH6 204 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 SLC25A39Q9BZJ4 359 aaPredicted RBP5.27□□□□□ -1.57
CNOT1-222ENST00000570139 OR51M1Q9H341 326 aa5.27□□□□□ -1.57
CNOT1-222ENST00000570139 C16orf95Q9H693 158 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms