RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 Q8TAT8 98 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 VGLL1Q99990 258 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 AGPAT4-IT1Q9H0P7 198 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 CDIP1Q9H305 208 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 Q9H3A6 140 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 TNFSF18Q9UNG2 199 aa6.47□□□□□ -1.37
GTF3C1-210ENST00000569394 DEFB131BA0A096LNP1 70 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 SPART-AS1P0CW21 52 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 DEFB130BP0DP73 79 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 DEFB130AP0DP74 79 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 CDC34P49427 236 aaPredicted RBP6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 TAS2R45P59539 299 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 BTN1A1Q13410 526 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 GFI1BQ5VTD9 330 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 Q6ZQT7 251 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 OR2G3Q8NGZ4 309 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 C2CD4CQ8TF44 421 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 SGK494Q96LW2 274 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.38
GTF3C1-210ENST00000569394 RYR2Q92736 4967 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 BORCS7-ASMTA0A0B4J1R7 106 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 PGPA6NDG6 321 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 SMIM9A6NGZ8 99 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 A8MTW9 85 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 NPIPB6E9PJ23 425 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 H3BS24 57 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 AMBPP02760 352 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 GPX1P07203 203 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 ARL14EPLP0DKL9 152 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 LEPP41159 167 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 CSN1S1P47710 185 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 GNG5P63218 68 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 CD300CQ08708 224 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 NIPSNAP3BQ9BS92 247 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 DKK2Q9UBU2 259 aa6.45□□□□□ -1.38
GTF3C1-210ENST00000569394 TRAV10A0A0B4J240 114 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 A0A1B0GV50 99 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 ZNF253O75346 499 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 TSPOP30536 169 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 FGF8P55075 233 aaPredicted RBP6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 DAD1P61803 113 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 PDE6HQ13956 83 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 TMEM78Q5T7P6 136 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 PRR9Q5T870 116 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 OR11H4Q8NGC9 324 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 CMTM2Q8TAZ6 248 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 RAB24Q969Q5 203 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 NEU1Q99519 415 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 TMPRSS5Q9H3S3 457 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 NOP10Q9NPE3 64 aaKnown RBP6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 PRELID1Q9Y255 219 aa6.44□□□□□ -1.38
GTF3C1-210ENST00000569394 IGHV4-4A0A075B6R2 117 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 C7orf71A4D174 169 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 TMEM189A5PLL7 270 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 SLC25A5P05141 298 aaKnown RBP6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 TAS2R60P59551 318 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 UBE2G2P60604 165 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 MUC21Q5SSG8 566 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 GOLT1AQ6ZVE7 132 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 CCDC28AQ8IWP9 274 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 ASB13Q8WXK3 278 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 LINC00476Q8WZB0 136 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 PSMG3Q9BT73 122 aaPredicted RBP6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 ACTR3CQ9C0K3 210 aaPredicted RBP6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 CYTL1Q9NRR1 136 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 NAGKQ9UJ70 344 aa6.43□□□□□ -1.38
GTF3C1-210ENST00000569394 ALMS1Q8TCU4 4167 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 TRAV8-1A0A0A6YYK1 113 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 CBY3A6NI87 242 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 DIRC3C9JPN6 131 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 C11orf94C9JXX5 98 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 H7BYZ3 331 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 STAG3L2P0CL84 134 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 STAG3L3P0CL85 134 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 GCHFRP30047 84 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 ZNF726P1Q15940 193 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 AKR1C8PQ5T2L2 129 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 PQLC2Q6ZP29 291 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 C9orf47Q6ZRZ4 202 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 GNPNAT1Q96EK6 184 aaPredicted RBP6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 MRPL53Q96EL3 112 aaKnown RBP6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 LINC00477Q96M19 166 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 ARPC5LQ9BPX5 153 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 ZNF471Q9BX82 626 aaPredicted RBP6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 OTORQ9NRC9 128 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 ZNF492Q9P255 531 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 TP53TG3Q9ULZ0 132 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 APLNQ9ULZ1 77 aa6.42□□□□□ -1.38
GTF3C1-210ENST00000569394 KANTRA0A1W2PQU2 76 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 GAGE12BA1L429 117 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 PLAC8L1A1L4L8 177 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 SNURFLB1AK76 121 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 F5H768 121 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 F6UZH7 168 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 PFDN1O60925 122 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 GAGE7O76087 117 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 MBP02144 154 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 GAGE12FP0CL80 117 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms