RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ISLRO14498 428 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 PDE6DO43924 150 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
COMMD4-225ENST00000569245 ID1P41134 155 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 TRPT1Q86TN4 253 aaKnown RBP10.59□□□□□ -0.71
COMMD4-225ENST00000569245 EXOC3-AS1Q8N2X6 119 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 C16orf92Q96LL3 132 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 LINC00052Q96N35 136 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 PRELID1Q9Y255 219 aa10.59□□□□□ -0.71
COMMD4-225ENST00000569245 CSMD3Q7Z407 3707 aa10.58□□□□□ -0.72
COMMD4-225ENST00000569245 TMEM250H0YL14 139 aa10.58□□□□□ -0.72
COMMD4-225ENST00000569245 MORN3Q6PF18 240 aaPredicted RBP10.58□□□□□ -0.72
COMMD4-225ENST00000569245 HIST1H2BAQ96A08 127 aa10.58□□□□□ -0.72
COMMD4-225ENST00000569245 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
COMMD4-225ENST00000569245 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
COMMD4-225ENST00000569245 TREM1Q9NP99 234 aa10.58□□□□□ -0.72
COMMD4-225ENST00000569245 EPDR1Q9UM22 224 aa10.58□□□□□ -0.72
COMMD4-225ENST00000569245 DYNC2H1Q8NCM8 4307 aaKnown RBP10.57□□□□□ -0.72
COMMD4-225ENST00000569245 SLC25A5P05141 298 aaKnown RBP10.57□□□□□ -0.72
COMMD4-225ENST00000569245 CMTM2Q8TAZ6 248 aa10.57□□□□□ -0.72
COMMD4-225ENST00000569245 SLC35B3Q9H1N7 401 aa10.57□□□□□ -0.72
COMMD4-225ENST00000569245 LCE6AA0A183 80 aa10.56□□□□□ -0.72
COMMD4-225ENST00000569245 TCRAP04437 139 aa10.56□□□□□ -0.72
COMMD4-225ENST00000569245 HLA-DMBP28068 263 aa10.56□□□□□ -0.72
COMMD4-225ENST00000569245 CSN1S1P47710 185 aa10.56□□□□□ -0.72
COMMD4-225ENST00000569245 PSG3Q16557 428 aa10.56□□□□□ -0.72
COMMD4-225ENST00000569245 IGFL4Q6B9Z1 124 aa10.56□□□□□ -0.72
COMMD4-225ENST00000569245 RPUSD4Q96CM3 377 aaKnown RBP10.56□□□□□ -0.72
COMMD4-225ENST00000569245 RYR2Q92736 4967 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 SERTM2A0A1B0GWG4 89 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 SCO2A0A1W2PP80 73 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 TMEM218A2RU14 115 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 DIRC3C9JPN6 131 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 M0R3E3 92 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 PEX7O00628 323 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 NUTF2P61970 127 aaKnown RBP10.55□□□□□ -0.72
COMMD4-225ENST00000569245 RNF182Q8N6D2 247 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 C2CD4CQ8TF44 421 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 C20orf173Q96LM9 149 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
COMMD4-225ENST00000569245 H3BMM0 161 aa10.54□□□□□ -0.72
COMMD4-225ENST00000569245 DEFB4AO15263 64 aa10.54□□□□□ -0.72
COMMD4-225ENST00000569245 IGKV3-20P01619 116 aa10.54□□□□□ -0.72
COMMD4-225ENST00000569245 GIG44P09565 113 aaPredicted RBP10.54□□□□□ -0.72
COMMD4-225ENST00000569245 SFTA3P0C7M3 94 aa10.54□□□□□ -0.72
COMMD4-225ENST00000569245 GNG5P63218 68 aa10.54□□□□□ -0.72
COMMD4-225ENST00000569245 SACSQ9NZJ4 4579 aa10.53□□□□□ -0.72
COMMD4-225ENST00000569245 ZNF705FA8MVS1 300 aaPredicted RBP10.53□□□□□ -0.72
COMMD4-225ENST00000569245 AKR1C3P42330 323 aa10.53□□□□□ -0.72
COMMD4-225ENST00000569245 DEFB1P60022 68 aa10.53□□□□□ -0.72
COMMD4-225ENST00000569245 KLF12Q9Y4X4 402 aa10.53□□□□□ -0.72
COMMD4-225ENST00000569245 RBAKDNA6NC62 111 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 NUPR2A6NF83 97 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 FBLL1A6NHQ2 334 aaKnown RBP10.52□□□□□ -0.73
COMMD4-225ENST00000569245 K7EQM0 130 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 S100A9P06702 114 aaKnown RBP10.52□□□□□ -0.73
COMMD4-225ENST00000569245 HLA-DRB4P13762 266 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 CNN1P51911 297 aaKnown RBP10.52□□□□□ -0.73
COMMD4-225ENST00000569245 TAS2R60P59551 318 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 TMEM183BQ1AE95 376 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 FAM74A3Q4VXF1 159 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 EBLN2Q6P2I7 272 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 GOLT1AQ6ZVE7 132 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 ZNF738Q8NE65 137 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 OR4B1Q8NGF8 309 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 C11orf45Q8TAV5 145 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 PARLQ9H300 379 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 C11orf68Q9H3H3 251 aaKnown RBP10.52□□□□□ -0.73
COMMD4-225ENST00000569245 XCL2Q9UBD3 114 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 RPH3ALQ9UNE2 315 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 HLA-DRB4X5D2U9 266 aa10.52□□□□□ -0.73
COMMD4-225ENST00000569245 TRBV6-1A0A0K0K1D8 114 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 KRBOX1C9JBD0 128 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 RPL35P42766 123 aaKnown RBP10.51□□□□□ -0.73
COMMD4-225ENST00000569245 C10orf91Q5T1B1 145 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 GDF5OSQ5U4N7 250 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 CEMP1Q6PRD7 247 aaPredicted RBP10.51□□□□□ -0.73
COMMD4-225ENST00000569245 FOXI2Q6ZQN5 318 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 TMEM75Q8N9X5 138 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 SEC11CQ9BY50 192 aa10.51□□□□□ -0.73
COMMD4-225ENST00000569245 SAV1Q9H4B6 383 aaPredicted RBP10.51□□□□□ -0.73
COMMD4-225ENST00000569245 KLK5Q9Y337 293 aaPredicted RBP10.51□□□□□ -0.73
COMMD4-225ENST00000569245 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
COMMD4-225ENST00000569245 IGLV2-11P01706 119 aa10.5□□□□□ -0.73
COMMD4-225ENST00000569245 MIFP14174 115 aa10.5□□□□□ -0.73
COMMD4-225ENST00000569245 ADCYAP1P18509 176 aa10.5□□□□□ -0.73
COMMD4-225ENST00000569245 CEBPGP53567 150 aa10.5□□□□□ -0.73
COMMD4-225ENST00000569245 FXYD7P58549 80 aa10.5□□□□□ -0.73
COMMD4-225ENST00000569245 NANOS2P60321 138 aaKnown RBP10.5□□□□□ -0.73
COMMD4-225ENST00000569245 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
COMMD4-225ENST00000569245 PHLDA1Q8WV24 401 aaPredicted RBP10.5□□□□□ -0.73
COMMD4-225ENST00000569245 LINC00479Q96M42 142 aa10.5□□□□□ -0.73
COMMD4-225ENST00000569245 DERL1Q9BUN8 251 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms