RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 SMIM1B2RUZ4 78 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 K7EQD1 137 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 NDUFA4O00483 81 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 HMGB3O15347 200 aaKnown RBP5.92□□□□□ -1.46
CDH11-216ENST00000569128 HYPMO75409 117 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 EIF5AP63241 154 aaKnown RBP5.92□□□□□ -1.46
CDH11-216ENST00000569128 ZNF726P1Q15940 193 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 LEMD1Q68G75 181 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 TEX261Q6UWH6 196 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 MIR17HGQ75NE6 70 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 RPP25LQ8N5L8 163 aaKnown RBP5.92□□□□□ -1.46
CDH11-216ENST00000569128 C3orf56Q8N813 242 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 ZNF680Q8NEM1 530 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 OR10G4Q8NGN3 311 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 OR10G7Q8NGN6 311 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 TMEM190Q8WZ59 177 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 SCRT1Q9BWW7 348 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 TENM1Q9UKZ4 2725 aa5.92□□□□□ -1.46
CDH11-216ENST00000569128 TMEM213A2RRL7 107 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 RS1O15537 224 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 COX7A2P2O60397 106 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 FABP1P07148 127 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 PRSS1P07477 247 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 SNRPCP09234 159 aaKnown RBP5.91□□□□□ -1.46
CDH11-216ENST00000569128 M6PRP20645 277 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 MYCNOSP40205 109 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 SULT1A2P50226 295 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 SERF2P84101 59 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 LAGE3Q14657 143 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 ACOT6Q3I5F7 207 aaPredicted RBP5.91□□□□□ -1.46
CDH11-216ENST00000569128 AKR1C8PQ5T2L2 129 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 FAM78BQ5VT40 261 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 C10orf113Q5VZT2 155 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 IL34Q6ZMJ4 242 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 FAM213BQ8TBF2 198 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 SLC25A39Q9BZJ4 359 aaPredicted RBP5.91□□□□□ -1.46
CDH11-216ENST00000569128 SLC25A22Q9H936 323 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 HIGD1AQ9Y241 93 aa5.91□□□□□ -1.46
CDH11-216ENST00000569128 A0A1B0GV50 99 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 ZNF98A6NK75 572 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 H3BRN7 92 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 NXPH4O95158 308 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 ZP3P21754 424 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 NPPCP23582 126 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 CRYBB3P26998 211 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 FGF8P55075 233 aaPredicted RBP5.9□□□□□ -1.46
CDH11-216ENST00000569128 LCN15Q6UWW0 184 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 LINC00305Q7Z4B0 112 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 SMIM29Q86T20 159 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 FAM167A-AS1Q96KT0 104 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 RABAC1Q9UI14 185 aa5.9□□□□□ -1.46
CDH11-216ENST00000569128 IGHV7-4-1A0A0J9YVY3 117 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 C2orf70A6NJV1 201 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 SEC14L6B5MCN3 397 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 K7EMT4 169 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 LGALS9O00182 355 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 OVOL1O14753 267 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 ATP5LO75964 103 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 PYYP10082 97 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 CDC34P49427 236 aaPredicted RBP5.89□□□□□ -1.47
CDH11-216ENST00000569128 CCL20P78556 96 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 EIF5AL1Q6IS14 154 aaKnown RBP5.89□□□□□ -1.47
CDH11-216ENST00000569128 OR9G4Q8NGQ1 327 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 PHYHIPLQ96FC7 376 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 METTL26Q96S19 204 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 SHANK2-AS3Q9BTD1 123 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 SLC25A2Q9BXI2 301 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 ACTR3CQ9C0K3 210 aaPredicted RBP5.89□□□□□ -1.47
CDH11-216ENST00000569128 KCNIP2Q9NS61 270 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 SMPXQ9UHP9 88 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 FUT9Q9Y231 359 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 UFC1Q9Y3C8 167 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 SMAD5-AS1Q9Y6J3 95 aa5.89□□□□□ -1.47
CDH11-216ENST00000569128 IGKV3-7A0A075B6H7 116 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 CTXND1A0A1B0GTU2 59 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 A0A1W2PPV4 95 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 ZNF705EA8MWA4 302 aaPredicted RBP5.88□□□□□ -1.47
CDH11-216ENST00000569128 A8MWP6 167 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 UMAD1C9J7I0 102 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 TEX46H3BTG2 121 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 IFNA7P01567 189 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 MBP02144 154 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 C8orf88P0DMB2 117 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 PRB4P10163 310 aaPredicted RBP5.88□□□□□ -1.47
CDH11-216ENST00000569128 FOLR2P14207 255 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 CBLN1P23435 193 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 RIPPLY3P57055 190 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 RHOBP62745 196 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 LINC00242Q5T6M2 205 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 PFDN5Q99471 154 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 RNF2Q99496 336 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 RHPN1-AS1Q9BWJ2 59 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 DAZ1Q9NQZ3 744 aaKnown RBP5.88□□□□□ -1.47
CDH11-216ENST00000569128 MLXQ9UH92 298 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 WNK1Q9H4A3 2382 aa5.88□□□□□ -1.47
CDH11-216ENST00000569128 MAP1LC3B2A6NCE7 125 aa5.87□□□□□ -1.47
CDH11-216ENST00000569128 H3BQ15 152 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms