RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CCL20P78556 96 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 SRSF3P84103 164 aaKnown RBP10.32□□□□□ -0.76
CMTM3-215ENST00000568477 PRR20EP86478 221 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 PRR20CP86479 221 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 PRR20DP86480 221 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 PRR20BP86481 221 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 PRR20AP86496 221 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 C10orf91Q5T1B1 145 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 BPIFA4PQ86YQ2 179 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 TMEM37Q8WXS4 190 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 SLC50A1Q9BRV3 221 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 NIPSNAP3BQ9BS92 247 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 PPP1R14DQ9NXH3 145 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 VPS13DQ5THJ4 4388 aa10.32□□□□□ -0.76
CMTM3-215ENST00000568477 MAP1LC3B2A6NCE7 125 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 RBFOX3A6NFN3 312 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 MIC13Q5XKP0 118 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 CCDC28AQ8IWP9 274 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 OR1L4Q8NGR5 311 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 RPUSD4Q96CM3 377 aaKnown RBP10.31□□□□□ -0.76
CMTM3-215ENST00000568477 NDUFAF3Q9BU61 184 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 SEC11CQ9BY50 192 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 MAP1LC3BQ9GZQ8 125 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 EIF5A2Q9GZV4 153 aaKnown RBP10.31□□□□□ -0.76
CMTM3-215ENST00000568477 DNAJC4Q9NNZ3 241 aa10.31□□□□□ -0.76
CMTM3-215ENST00000568477 YTHDF2Q9Y5A9 579 aaKnown RBP10.31□□□□□ -0.76
CMTM3-215ENST00000568477 CRXO43186 299 aaPredicted RBP10.3□□□□□ -0.76
CMTM3-215ENST00000568477 TAGLN2P37802 199 aaKnown RBP10.3□□□□□ -0.76
CMTM3-215ENST00000568477 B2MP61769 119 aa10.3□□□□□ -0.76
CMTM3-215ENST00000568477 ZNF506Q5JVG8 444 aa10.3□□□□□ -0.76
CMTM3-215ENST00000568477 MORN5Q5VZ52 161 aa10.3□□□□□ -0.76
CMTM3-215ENST00000568477 FAM122CQ6P4D5 195 aa10.3□□□□□ -0.76
CMTM3-215ENST00000568477 RAB24Q969Q5 203 aa10.3□□□□□ -0.76
CMTM3-215ENST00000568477 PFDN5Q99471 154 aa10.3□□□□□ -0.76
CMTM3-215ENST00000568477 ZNF331Q9NQX6 463 aaPredicted RBP10.3□□□□□ -0.76
CMTM3-215ENST00000568477 CARHSP1Q9Y2V2 147 aaKnown RBP10.3□□□□□ -0.76
CMTM3-215ENST00000568477 DNAH6Q9C0G6 4158 aa10.29□□□□□ -0.76
CMTM3-215ENST00000568477 A0A1B0GV50 99 aa10.29□□□□□ -0.76
CMTM3-215ENST00000568477 A0A1W2PPV4 95 aa10.29□□□□□ -0.76
CMTM3-215ENST00000568477 IFNA1P01562 189 aa10.29□□□□□ -0.76
CMTM3-215ENST00000568477 SNRPCP09234 159 aaKnown RBP10.29□□□□□ -0.76
CMTM3-215ENST00000568477 CDC34P49427 236 aaPredicted RBP10.29□□□□□ -0.76
CMTM3-215ENST00000568477 KHDC3LQ587J8 217 aa10.29□□□□□ -0.76
CMTM3-215ENST00000568477 SSX7Q7RTT5 188 aa10.29□□□□□ -0.76
CMTM3-215ENST00000568477 TRAV12-2A0A075B6T6 113 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 ZNF705GA8MUZ8 300 aaPredicted RBP10.28□□□□□ -0.76
CMTM3-215ENST00000568477 C9JQL5 133 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 F8W036 122 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 H3BTX0 84 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 SLC17A3O00476 420 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 NDUFS6O75380 124 aaKnown RBP10.28□□□□□ -0.76
CMTM3-215ENST00000568477 SFTA3P0C7M3 94 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 IGLC2P0DOY2 106 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 PRB4P10163 310 aaPredicted RBP10.28□□□□□ -0.76
CMTM3-215ENST00000568477 PPT1P50897 306 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 DAD1P61803 113 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 FAM210BQ96KR6 192 aa10.28□□□□□ -0.76
CMTM3-215ENST00000568477 TRAV5A0A0B4J249 113 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 H3BQ15 152 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 APOC3P02656 99 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 P0DMU3 169 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 FAM231AP0DMU4 169 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 FAM231CP0DMU5 169 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 HTN3P15516 51 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 ADCYAP1P18509 176 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 TSPOP30536 169 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 ICAM4Q14773 271 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 TMEM256Q8N2U0 113 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 OR10J6PQ8NGY7 276 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 LINC01587Q99440 93 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
CMTM3-215ENST00000568477 DNAH10Q8IVF4 4471 aa10.26□□□□□ -0.77
CMTM3-215ENST00000568477 LYRM9A8MSI8 78 aa10.26□□□□□ -0.77
CMTM3-215ENST00000568477 BCL2P10415 239 aa10.26□□□□□ -0.77
CMTM3-215ENST00000568477 CDKN1BP46527 198 aa10.26□□□□□ -0.77
CMTM3-215ENST00000568477 FGF8P55075 233 aaPredicted RBP10.26□□□□□ -0.77
CMTM3-215ENST00000568477 GCSAMLQ5JQS6 135 aa10.26□□□□□ -0.77
CMTM3-215ENST00000568477 SVBPQ8N300 66 aa10.26□□□□□ -0.77
CMTM3-215ENST00000568477 MANBALQ9NQG1 85 aa10.26□□□□□ -0.77
CMTM3-215ENST00000568477 VAX2Q9UIW0 290 aa10.26□□□□□ -0.77
CMTM3-215ENST00000568477 PRAC2D3DTV9 90 aa10.25□□□□□ -0.77
CMTM3-215ENST00000568477 CXorf1O96002 111 aa10.25□□□□□ -0.77
CMTM3-215ENST00000568477 PRM2P04554 102 aa10.25□□□□□ -0.77
CMTM3-215ENST00000568477 SRP19P09132 144 aaKnown RBP10.25□□□□□ -0.77
CMTM3-215ENST00000568477 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
CMTM3-215ENST00000568477 STAG3L3P0CL85 134 aa10.25□□□□□ -0.77
CMTM3-215ENST00000568477 TAS2R60P59551 318 aa10.25□□□□□ -0.77
CMTM3-215ENST00000568477 POM121L12Q8N7R1 296 aa10.25□□□□□ -0.77
CMTM3-215ENST00000568477 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
CMTM3-215ENST00000568477 AZU1P20160 251 aa10.24□□□□□ -0.77
CMTM3-215ENST00000568477 RXFP4Q8TDU9 374 aa10.24□□□□□ -0.77
CMTM3-215ENST00000568477 MRPL32Q9BYC8 188 aaKnown RBP10.24□□□□□ -0.77
CMTM3-215ENST00000568477 ZNF586Q9NXT0 402 aa10.24□□□□□ -0.77
CMTM3-215ENST00000568477 TMEM14CQ9P0S9 112 aa10.24□□□□□ -0.77
CMTM3-215ENST00000568477 FUT9Q9Y231 359 aa10.24□□□□□ -0.77
CMTM3-215ENST00000568477 ZNF253O75346 499 aa10.23□□□□□ -0.77
CMTM3-215ENST00000568477 SNAPINO95295 136 aa10.23□□□□□ -0.77
CMTM3-215ENST00000568477 HTN1P15515 57 aa10.23□□□□□ -0.77
CMTM3-215ENST00000568477 SOHLH1Q5JUK2 328 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms