RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	TAAR5	O14804	337 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	MRPS12	O15235	138 aa	Known RBP	4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	BCL2L11	O43521	198 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	RPL12	P30050	165 aa	Known RBP	4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	PCP4	P48539	62 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	RHOB	P62745	196 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	ATP6V1F	Q16864	119 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	RRN3P1	Q2M238	152 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	VWC2	Q2TAL6	325 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	FAM74A1	Q5RGS3	127 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	C10orf91	Q5T1B1	145 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	BPIFA4P	Q86YQ2	179 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	RPP25L	Q8N5L8	163 aa	Known RBP	4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	TMEM252	Q8N6L7	170 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	OR8A1	Q8NGG7	326 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	RXFP4	Q8TDU9	374 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	TMEM37	Q8WXS4	190 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	RPUSD4	Q96CM3	377 aa	Known RBP	4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	NIPSNAP3B	Q9BS92	247 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	TMEM208	Q9BTX3	173 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	SMCO4	Q9NRQ5	59 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	CYTL1	Q9NRR1	136 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	WDR83OS	Q9Y284	106 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	BIRC6	Q9NR09	4857 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	LOC102723971	A0A1B0GUV8	181 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	TSTD3	H0UI37	97 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	TCAP	O15273	167 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	CRX	O43186	299 aa	Predicted RBP	4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	INS	P01308	110 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	MB	P02144	154 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	S100A2	P29034	98 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	RPL29	P47914	159 aa	Known RBP	4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	EIF5A	P63241	154 aa	Known RBP	4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	BLOC1S1	P78537	153 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	HIST1H1A	Q02539	215 aa	Predicted RBP	4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	NHLH2	Q02577	135 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	TNP2	Q05952	138 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	FABP9	Q0Z7S8	132 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	SPINK13	Q1W4C9	94 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	FAM222A	Q5U5X8	452 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	MORN5	Q5VZ52	161 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	MIC13	Q5XKP0	118 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	TMEM88	Q6PEY1	159 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	LCN15	Q6UWW0	184 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	OR1L4	Q8NGR5	311 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	SLC50A1	Q9BRV3	221 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	NDUFAF3	Q9BU61	184 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	SEC11C	Q9BY50	192 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	SLC25A31	Q9H0C2	315 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	SLC39A9	Q9NUM3	307 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	DKK2	Q9UBU2	259 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	PXMP4	Q9Y6I8	212 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	MUC4	Q99102	2169 aa		4.94	□□□□□ -1.62
SF3B3-209	ENST00000567635	RYR2	Q92736	4967 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	TRAV5	A0A0B4J249	113 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	UBE2L5P	A0A1B0GUS4	154 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635		H3BQ15	152 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	MPDU1	O75352	247 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	MT-ND4L	P03901	98 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	SNRPC	P09234	159 aa	Known RBP	4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	FGF7	P21781	194 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	DAD1	P61803	113 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	PKIA	P61925	76 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	BAX	Q07812	192 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	GUK1	Q16774	197 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	CBLN2	Q8IUK8	224 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	BAP18	Q8IXM2	172 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	ZFP82	Q8N141	532 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	TMEM256	Q8N2U0	113 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	OR10J6P	Q8NGY7	276 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	STOML3	Q8TAV4	291 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	SAT2	Q96F10	170 aa	Predicted RBP	4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	C14orf144	Q96I85	54 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	FAM210B	Q96KR6	192 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	LINC01587	Q99440	93 aa		4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	ZNF471	Q9BX82	626 aa	Predicted RBP	4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.93	□□□□□ -1.62
SF3B3-209	ENST00000567635	TRAV12-2	A0A075B6T6	113 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635		H3BTX0	84 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	SLC17A3	O00476	420 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	PRM2	P04554	102 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635		P0DMU3	169 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	FAM231A	P0DMU4	169 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	FAM231C	P0DMU5	169 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	IGLC2	P0DOY2	106 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	PRB4	P10163	310 aa	Predicted RBP	4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	TPT1	P13693	172 aa	Known RBP	4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	TSPO	P30536	169 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	CDKN1B	P46527	198 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	C21orf62-AS1	Q17RA5	79 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	RAB24	Q969Q5	203 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	WFDC1	Q9HC57	220 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	ZNF586	Q9NXT0	402 aa		4.92	□□□□□ -1.62
SF3B3-209	ENST00000567635	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.91	□□□□□ -1.62
SF3B3-209	ENST00000567635	COLCA2	A8K830	154 aa		4.91	□□□□□ -1.62
SF3B3-209	ENST00000567635	LYRM9	A8MSI8	78 aa		4.91	□□□□□ -1.62
SF3B3-209	ENST00000567635	PRAC2	D3DTV9	90 aa		4.91	□□□□□ -1.62
SF3B3-209	ENST00000567635	ZNF253	O75346	499 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 220.2 ms