RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 ZNF491Q8N8L2 437 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 SCRT2Q9NQ03 307 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 UFC1Q9Y3C8 167 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 JMJD1CQ15652 2540 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 AGRNO00468 2067 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 SHISA9B4DS77 424 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 SH2D1AO60880 128 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 ZNF80P51504 273 aaPredicted RBP5.07□□□□□ -1.6
GINS3-206ENST00000567143 DLX6P56179 175 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 ATP5IP56385 69 aaPredicted RBP5.07□□□□□ -1.6
GINS3-206ENST00000567143 SFTA2Q6UW10 78 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 C12orf54Q6X4T0 127 aa5.07□□□□□ -1.6
GINS3-206ENST00000567143 CHCHD1Q96BP2 118 aaKnown RBP5.07□□□□□ -1.6
GINS3-206ENST00000567143 CRYGCP07315 174 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 PSG3Q16557 428 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 OCIAD2Q56VL3 154 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 MRPL52Q86TS9 123 aaKnown RBP5.06□□□□□ -1.6
GINS3-206ENST00000567143 NUP37Q8NFH4 326 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 MEGF9Q9H1U4 602 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 CFAP46Q8IYW2 2715 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 PRAC2D3DTV9 90 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 IGLV1-47P01700 117 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 CD3EP07766 207 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 EGR2P11161 476 aaPredicted RBP5.06□□□□□ -1.6
GINS3-206ENST00000567143 RPL24P83731 157 aaKnown RBP5.06□□□□□ -1.6
GINS3-206ENST00000567143 TMEM97Q5BJF2 176 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 OR4A5Q8NH83 315 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 ZNF414Q96IQ9 312 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 NDFIP1Q9BT67 221 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 SHANK2-AS3Q9BTD1 123 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 CDSNQ15517 529 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 MRPL51Q4U2R6 128 aaKnown RBP5.06□□□□□ -1.6
GINS3-206ENST00000567143 PET117Q6UWS5 81 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 C2orf91Q6ZV80 131 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 DEFB125Q8N687 156 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 JMJD8Q96S16 334 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 NCOR1P1Q9H4R4 102 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 NACAE9PAV3 2078 aa5.06□□□□□ -1.6
GINS3-206ENST00000567143 EPG5Q9HCE0 2579 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 A0A096LNJ9 63 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 HAX1O00165 279 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 CCL21O00585 134 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 COTL1Q14019 142 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 ZNF672Q499Z4 452 aaPredicted RBP5.05□□□□□ -1.6
GINS3-206ENST00000567143 GTSCR1Q86UQ5 136 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 ORMDL3Q8N138 153 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 DYNAPQ8N1N2 210 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 WFDC12Q8WWY7 111 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 NAV2Q8IVL1 2488 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 TRAV30A0A087WSZ9 112 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 NBR2O15453 112 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 HIST1H1AQ02539 215 aaPredicted RBP5.05□□□□□ -1.6
GINS3-206ENST00000567143 KIR3DS1Q14943 382 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 PIP4P2Q8N4L2 257 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 TMEM160Q9NX00 188 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 PPP1R14DQ9NXH3 145 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 ZNF492Q9P255 531 aa5.05□□□□□ -1.6
GINS3-206ENST00000567143 COX8AP10176 69 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 LEPP41159 167 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 FAM162BQ5T6X4 162 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 FER1L6-AS1Q8NA97 138 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 IFI27L1Q96BM0 104 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 C21orf62Q9NYP8 219 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 NIPBLQ6KC79 2804 aaeCLIP5.04□□□□□ -1.6
GINS3-206ENST00000567143 IGKV2D-26A0A0A0MRZ7 120 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 G3V318 75 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 CRXO43186 299 aaPredicted RBP5.04□□□□□ -1.6
GINS3-206ENST00000567143 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
GINS3-206ENST00000567143 RPL11P62913 178 aaKnown RBP5.04□□□□□ -1.6
GINS3-206ENST00000567143 LINC01545Q5VT33 79 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 FAM71F2Q6NXP2 309 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 HIF1ANQ9NWT6 349 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 DPM3Q9P2X0 92 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 FBN2P35556 2912 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 NF1P21359 2839 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 A1L4Q6 167 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 H3BRN7 92 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 CT83Q5H943 113 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 FAM104BQ5XKR9 115 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 IL17RELQ6ZVW7 336 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 LINC00311Q8N616 119 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 GLMPQ8WWB7 406 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 FOXC2Q99958 501 aa5.04□□□□□ -1.6
GINS3-206ENST00000567143 PEF1Q9UBV8 284 aaKnown RBP5.04□□□□□ -1.6
GINS3-206ENST00000567143 CHD6Q8TD26 2715 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 LINC01548A6NM66 108 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 NPIPB6E9PJ23 425 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 TRGV3P03979 118 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 CLEC3BP05452 202 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 CRYGBP07316 175 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 MFAP4P55083 255 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 TMEM219Q86XT9 240 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 ARPC1AQ92747 370 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 FANCD2OSQ96PS1 177 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 GFRA4Q9GZZ7 299 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 A0A0G2JLM5 398 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 HBDP02042 147 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 EFNA4P52798 201 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 TMEM30BQ3MIR4 351 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 CLEC19AQ6UXS0 136 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms