RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CT55Q8WUE5 264 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 BORCS7Q96B45 105 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 GPER1Q99527 375 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 CMSS1Q9BQ75 279 aaKnown RBP2.29□□□□□ -2.04
CNOT1-209ENST00000566240 COMMD5Q9GZQ3 224 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 CST11Q9H112 138 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 IL36BQ9NZH7 164 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 DOK5Q9P104 306 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 PRELID3BQ9Y3B1 194 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 R4GMQ9 66 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 RP1P56715 2156 aa2.29□□□□□ -2.04
CNOT1-209ENST00000566240 CACNA1EQ15878 2313 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 PIGBOS1A0A0B4J2F0 54 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 IFITM5A6NNB3 132 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 LY6LH3BQJ8 138 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 H3BT86 120 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 GABARAPH6UMI1 98 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 CREBL2O60519 120 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-209ENST00000566240 NOS1APO75052 506 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-209ENST00000566240 MRPL33O75394 65 aaKnown RBP2.28□□□□□ -2.04
CNOT1-209ENST00000566240 CYB5AP00167 134 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 CCL4P13236 92 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 HLA-DMBP28068 263 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 EVX1P49640 407 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 GNG2P59768 71 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 RUNX1Q01196 453 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 CDK10Q15131 360 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 NDUFA5Q16718 116 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 LYZL1Q6UWQ5 148 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 AAED1Q7RTV5 226 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 SNX29P2Q8IUI4 249 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 OR6V1Q8N148 313 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 OR4X2Q8NGF9 303 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 OR5D14Q8NGL3 314 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 SMIM4Q8WVI0 70 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 SLAMF6Q96DU3 332 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 ATG5Q9H1Y0 275 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 TMEM138Q9NPI0 162 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 MED29Q9NX70 200 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 SCP2D1Q9UJQ7 156 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 OR52A1Q9UKL2 312 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 NUBP2Q9Y5Y2 271 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 CHCHD2Q9Y6H1 151 aaPredicted RBP2.28□□□□□ -2.04
CNOT1-209ENST00000566240 U3KQA8 63 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 V9GYH0 126 aa2.28□□□□□ -2.04
CNOT1-209ENST00000566240 CEP350Q5VT06 3117 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 TRAV26-2A0A0B4J265 109 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 TRAV41A0A0B4J266 112 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 FAM236DA0A1B0GTK5 79 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 A0A1B0GVG6 124 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 GGT3PA6NGU5 568 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 M0R135 149 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 KLF7O75840 302 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 LGALS1P09382 135 aaKnown RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 AKAIN1P0CW23 69 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 FAM236CP0DP71 79 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 S100GP29377 79 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 ERP29P30040 261 aaKnown RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 RPL28P46779 137 aaKnown RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 CAV3P56539 151 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 RPS20P60866 119 aaKnown RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 RAB14P61106 215 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H3AP68431 136 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 H3F3AP84243 136 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 HES1Q14469 280 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 RNASE10Q5GAN6 216 aaKnown RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 C10orf128Q5T292 105 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 LINC01590Q5TEZ4 76 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 ZNF705AQ6ZN79 300 aaPredicted RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 TMEM91Q6ZNR0 172 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 OR51A2Q8NGJ7 313 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 GRPEL2Q8TAA5 225 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 PP6455Q8WZ26 134 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 C11orf40Q8WZ69 217 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 PRRT1Q99946 306 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 TMEM147Q9BVK8 224 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 PBOV1Q9GZY1 135 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 TAS2R4Q9NYW5 299 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 PRO2289Q9P1D8 64 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 NAT8Q9UHE5 227 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 ATPIF1Q9UII2 106 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 NOP16Q9Y3C1 178 aaKnown RBP2.27□□□□□ -2.05
CNOT1-209ENST00000566240 TIMM9Q9Y5J7 89 aa2.27□□□□□ -2.05
CNOT1-209ENST00000566240 SPTBP11277 2137 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 TRAV17A0A0B4J275 112 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 RFPL4AA6NLU0 287 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 ZNF736B4DX44 427 aaPredicted RBP2.26□□□□□ -2.05
CNOT1-209ENST00000566240 RFPL4AL1F8VTS6 287 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 H3BSH0 61 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 CRYZL1O95825 349 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 PRM2P04554 102 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 CST2P09228 141 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 ZNF93P35789 620 aaPredicted RBP2.26□□□□□ -2.05
CNOT1-209ENST00000566240 RPS27P42677 84 aaKnown RBP2.26□□□□□ -2.05
CNOT1-209ENST00000566240 EMP1P54849 157 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 RRAS2P62070 204 aaPredicted RBP2.26□□□□□ -2.05
CNOT1-209ENST00000566240 CCL20P78556 96 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 ERHP84090 104 aaKnown RBP2.26□□□□□ -2.05
CNOT1-209ENST00000566240 GLYATL3Q5SZD4 288 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms