RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MIR17HGQ75NE6 70 aa9.52□□□□□ -0.89
SF3B3-206ENST00000565990 OR2K2Q8NGT1 345 aa9.52□□□□□ -0.89
SF3B3-206ENST00000565990 C2orf88Q9BSF0 95 aa9.52□□□□□ -0.89
SF3B3-206ENST00000565990 RHPN1-AS1Q9BWJ2 59 aa9.52□□□□□ -0.89
SF3B3-206ENST00000565990 A0A1W2PS18 150 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 K7EN84 100 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 SAP30O75446 220 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 ORM2P19652 201 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 CENPWQ5EE01 88 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 C1orf194Q5T5A4 169 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 KPRPQ5T749 579 aaPredicted RBP9.51□□□□□ -0.89
SF3B3-206ENST00000565990 DMRTA1Q5VZB9 504 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 SPATA31B1PQ5VZV4 182 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 C16orf54Q6UWD8 224 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 CMTM2Q8TAZ6 248 aa9.51□□□□□ -0.89
SF3B3-206ENST00000565990 SORL1Q92673 2214 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 KIR2DL5BA0A0G2JN68 375 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 KIR2DL5BA0A0G2JPC4 375 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 SMIM27A0A1W2PRY6 76 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 G3V4G9 280 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 OR7C2O60412 319 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 CRISP2P16562 243 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 S100A7P31151 101 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 LYZP61626 148 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 FAM162BQ5T6X4 162 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 CDPF1Q6NVV7 123 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 KIR2DL5AQ8N109 375 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 ZNF503Q96F45 646 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 FAM167A-AS1Q96KT0 104 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
SF3B3-206ENST00000565990 NBEAL1Q6ZS30 2694 aa9.5□□□□□ -0.89
SF3B3-206ENST00000565990 MGAM2Q2M2H8 2515 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 IGHV3-49A0A0A0MS15 119 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 ZNF785A8K8V0 405 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 COX7A2P2O60397 106 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 BMI1P35226 326 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 CD300EQ496F6 205 aaPredicted RBP9.49□□□□□ -0.89
SF3B3-206ENST00000565990 ATP5L2Q7Z4Y8 100 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 ZNF664Q8N3J9 261 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 OR1B1Q8NGR6 318 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 SHANK2-AS3Q9BTD1 123 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 SLC25A39Q9BZJ4 359 aaPredicted RBP9.49□□□□□ -0.89
SF3B3-206ENST00000565990 NAGKQ9UJ70 344 aa9.49□□□□□ -0.89
SF3B3-206ENST00000565990 IZUMO1RA6ND01 250 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 GGTLC3B5MD39 225 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 KRTAP10-11P60412 298 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 UBE2L3P68036 154 aaKnown RBP9.48□□□□□ -0.89
SF3B3-206ENST00000565990 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 CT83Q5H943 113 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 C10orf113Q5VZT2 155 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 S100A7AQ86SG5 101 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 GRAMD2BQ96HH9 432 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 C20orf144Q9BQM9 153 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 HIGD1AQ9Y241 93 aa9.48□□□□□ -0.89
SF3B3-206ENST00000565990 IGHV3OR16-13A0A075B7E8 117 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 IGHV3-74A0A0B4J1X5 117 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 IGHV3-66A0A0C4DH42 116 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 SNURFLB1AK76 121 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 H3BRN7 92 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 IGLV2-8P01709 118 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 IBA57Q5T440 356 aaKnown RBP9.47□□□□□ -0.89
SF3B3-206ENST00000565990 TEX43Q6ZNM6 134 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 LINC00305Q7Z4B0 112 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 DYNLRB2Q8TF09 96 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 RNF24Q9Y225 148 aa9.47□□□□□ -0.89
SF3B3-206ENST00000565990 TRAV2A0A0B4J234 112 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 TRBV6-1A0A0K0K1D8 114 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 PGPEP1LA6NFU8 196 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF705GA8MUZ8 300 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-206ENST00000565990 RAB4AP20338 218 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
SF3B3-206ENST00000565990 TMEM183BQ1AE95 376 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 MORN5Q5VZ52 161 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 LCN12Q6JVE5 192 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.9
SF3B3-206ENST00000565990 TCF24Q7RTU0 167 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 C17orf77Q96MU5 243 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
SF3B3-206ENST00000565990 KLF12Q9Y4X4 402 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 SMAD5-AS1Q9Y6J3 95 aa9.46□□□□□ -0.9
SF3B3-206ENST00000565990 FAM231BA6NCW3 169 aa9.45□□□□□ -0.9
SF3B3-206ENST00000565990 PEX7O00628 323 aa9.45□□□□□ -0.9
SF3B3-206ENST00000565990 MRPS12O15235 138 aaKnown RBP9.45□□□□□ -0.9
SF3B3-206ENST00000565990 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
SF3B3-206ENST00000565990 OR8I2Q8N0Y5 310 aa9.45□□□□□ -0.9
SF3B3-206ENST00000565990 GPR82Q96P67 336 aa9.45□□□□□ -0.9
SF3B3-206ENST00000565990 SPAG8Q99932 426 aaPredicted RBP9.45□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF331Q9NQX6 463 aaPredicted RBP9.45□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF586Q9NXT0 402 aa9.45□□□□□ -0.9
SF3B3-206ENST00000565990 ZNF492Q9P255 531 aa9.45□□□□□ -0.9
SF3B3-206ENST00000565990 SELENOKQ9Y6D0 94 aa9.45□□□□□ -0.9
SF3B3-206ENST00000565990 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms