RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 ODF3Q96PU9 254 aa7.13□□□□□ -1.27
CDH1-206ENST00000564676 Q9H3A6 140 aa7.13□□□□□ -1.27
CDH1-206ENST00000564676 YTHDF2Q9Y5A9 579 aaKnown RBP7.13□□□□□ -1.27
CDH1-206ENST00000564676 RYR3Q15413 4870 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 IGKV2-40A0A087WW87 121 aaPredicted RBP7.12□□□□□ -1.27
CDH1-206ENST00000564676 TRAV10A0A0B4J240 114 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 TEX48A0A1B0GUV7 120 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 IGLL5B9A064 214 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 TAAR5O14804 337 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 IGKV2D-40P01614 121 aaPredicted RBP7.12□□□□□ -1.27
CDH1-206ENST00000564676 TAS2R60P59551 318 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 KIR3DS1Q14943 382 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 FAM222AQ5U5X8 452 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 GFI1BQ5VTD9 330 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 C20orf144Q9BQM9 153 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 NIPSNAP3BQ9BS92 247 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 ACTR3CQ9C0K3 210 aaPredicted RBP7.12□□□□□ -1.27
CDH1-206ENST00000564676 AGPAT4-IT1Q9H0P7 198 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 SH3BGRL3Q9H299 93 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 DKK2Q9UBU2 259 aa7.12□□□□□ -1.27
CDH1-206ENST00000564676 RYR2Q92736 4967 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 DEFB131BA0A096LNP1 70 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 TRAV12-3A0A0B4J271 114 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 PGPA6NDG6 321 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 A6NJY4 79 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 H7BYZ3 331 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 AZU1P20160 251 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 TNP2Q05952 138 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 FAM74A1Q5RGS3 127 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 TMEM78Q5T7P6 136 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 C9orf47Q6ZRZ4 202 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 CMTM2Q8TAZ6 248 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 RXFP4Q8TDU9 374 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 RAB24Q969Q5 203 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 HYLS1Q96M11 299 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 VGLL1Q99990 258 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 OTORQ9NRC9 128 aa7.11□□□□□ -1.27
CDH1-206ENST00000564676 LY6G6CO95867 125 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 SLC25A5P05141 298 aaKnown RBP7.1□□□□□ -1.27
CDH1-206ENST00000564676 GPX1P07203 203 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 STAG3L2P0CL84 134 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 STAG3L3P0CL85 134 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 ARL14EPLP0DKL9 152 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 RNASE4P34096 147 aaKnown RBP7.1□□□□□ -1.27
CDH1-206ENST00000564676 DAD1P61803 113 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 AKR1C8PQ5T2L2 129 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 CCDC28AQ8IWP9 274 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 C16orf74Q96GX8 76 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 ARPC5LQ9BPX5 153 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 ZNF492Q9P255 531 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 RPH3ALQ9UNE2 315 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 ALMS1Q8TCU4 4167 aa7.1□□□□□ -1.27
CDH1-206ENST00000564676 DNAH1Q9P2D7 4330 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 C7orf71A4D174 169 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 HMSDA8MTL9 139 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 DIRC3C9JPN6 131 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 CXorf1O96002 111 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 HTN3P15516 51 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 GCHFRP30047 84 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 ZNF138P52744 262 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 TCTAP57738 103 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 ZNF493Q6ZR52 646 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 IQCF2Q8IXL9 164 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 KCNRGQ8N5I3 272 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 OR11H4Q8NGC9 324 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 LINC00476Q8WZB0 136 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 CYTL1Q9NRR1 136 aa7.09□□□□□ -1.27
CDH1-206ENST00000564676 A0A0D9SG52 128 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 KANTRA0A1W2PQU2 76 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 RBAKDNA6NC62 111 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 LYRM9A8MSI8 78 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 KLLNB2CW77 178 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 NMBP08949 121 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 DEFB130BP0DP73 79 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 DEFB130AP0DP74 79 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 CRISP2P16562 243 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 CD300CQ08708 224 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 BTN1A1Q13410 526 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 ZNF345Q14585 488 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 Q8TAT8 98 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 TMEM263Q8WUH6 116 aaKnown RBP7.08□□□□□ -1.28
CDH1-206ENST00000564676 FAM19A4Q96LR4 140 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 PYGO2Q9BRQ0 406 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 TMEM167BQ9NRX6 74 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 TIMM8BQ9Y5J9 83 aaPredicted RBP7.08□□□□□ -1.28
CDH1-206ENST00000564676 HYDINQ4G0P3 5121 aa7.08□□□□□ -1.28
CDH1-206ENST00000564676 LYSTQ99698 3801 aa7.07□□□□□ -1.28
CDH1-206ENST00000564676 IGHV4-4A0A075B6R2 117 aa7.07□□□□□ -1.28
CDH1-206ENST00000564676 CTXND1A0A1B0GTU2 59 aa7.07□□□□□ -1.28
CDH1-206ENST00000564676 PLAC8L1A1L4L8 177 aa7.07□□□□□ -1.28
CDH1-206ENST00000564676 GOLT1AQ6ZVE7 132 aa7.07□□□□□ -1.28
CDH1-206ENST00000564676 Q8N3U1 123 aa7.07□□□□□ -1.28
CDH1-206ENST00000564676 ZFAND2AQ8N6M9 145 aa7.07□□□□□ -1.28
CDH1-206ENST00000564676 RNASE8Q8TDE3 154 aaKnown RBP7.07□□□□□ -1.28
CDH1-206ENST00000564676 ZNF471Q9BX82 626 aaPredicted RBP7.07□□□□□ -1.28
CDH1-206ENST00000564676 NOP10Q9NPE3 64 aaKnown RBP7.07□□□□□ -1.28
CDH1-206ENST00000564676 APLNQ9ULZ1 77 aa7.07□□□□□ -1.28
CDH1-206ENST00000564676 TRBV7-9A0A0J9YWB2 115 aa7.06□□□□□ -1.28
CDH1-206ENST00000564676 CBY3A6NI87 242 aa7.06□□□□□ -1.28
CDH1-206ENST00000564676 SNURFLB1AK76 121 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms