RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 IGKV2-40A0A087WW87 121 aaPredicted RBP11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 TAAR5O14804 337 aa11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 IGKV2D-40P01614 121 aaPredicted RBP11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 CSN1S1P47710 185 aa11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 CDC34P49427 236 aaPredicted RBP11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 RANP62826 216 aaKnown RBP11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 SERF2P84101 59 aa11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 PHYHIPLQ96FC7 376 aa11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 AGPAT4-IT1Q9H0P7 198 aa11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 SH3BGRL3Q9H299 93 aa11.09□□□□□ -0.63
AC009088.3-201ENST00000563605 H7BYZ3 331 aa11.08□□□□□ -0.64
AC009088.3-201ENST00000563605 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
AC009088.3-201ENST00000563605 NDUFAF3Q9BU61 184 aa11.08□□□□□ -0.64
AC009088.3-201ENST00000563605 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
AC009088.3-201ENST00000563605 HMGB3O15347 200 aaKnown RBP11.07□□□□□ -0.64
AC009088.3-201ENST00000563605 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
AC009088.3-201ENST00000563605 CCDC28AQ8IWP9 274 aa11.07□□□□□ -0.64
AC009088.3-201ENST00000563605 LYPD1Q8N2G4 141 aa11.07□□□□□ -0.64
AC009088.3-201ENST00000563605 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
AC009088.3-201ENST00000563605 VGLL1Q99990 258 aa11.07□□□□□ -0.64
AC009088.3-201ENST00000563605 Q9H3A6 140 aa11.07□□□□□ -0.64
AC009088.3-201ENST00000563605 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 FAM74A1Q5RGS3 127 aa11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 TMEM78Q5T7P6 136 aa11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 C16orf74Q96GX8 76 aa11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 HYLS1Q96M11 299 aa11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 ACTR3CQ9C0K3 210 aaPredicted RBP11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
AC009088.3-201ENST00000563605 GPX1P07203 203 aa11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 ARL14EPLP0DKL9 152 aa11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 CD300CQ08708 224 aa11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 ZNF345Q14585 488 aa11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 AKR1C8PQ5T2L2 129 aa11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 CMTM2Q8TAZ6 248 aa11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 RAB24Q969Q5 203 aa11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 ARPC5LQ9BPX5 153 aa11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 TIMM8BQ9Y5J9 83 aaPredicted RBP11.05□□□□□ -0.64
AC009088.3-201ENST00000563605 C7orf71A4D174 169 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 SLC25A5P05141 298 aaKnown RBP11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 BTN1A1Q13410 526 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 TMEM88Q6PEY1 159 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 ZNF493Q6ZR52 646 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 C9orf47Q6ZRZ4 202 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 IQCF2Q8IXL9 164 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 TMEM263Q8WUH6 116 aaKnown RBP11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 OTORQ9NRC9 128 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 RPH3ALQ9UNE2 315 aa11.04□□□□□ -0.64
AC009088.3-201ENST00000563605 KANTRA0A1W2PQU2 76 aa11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 HMSDA8MTL9 139 aa11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 F5H768 121 aa11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 CXorf1O96002 111 aa11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 STAG3L2P0CL84 134 aa11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 STAG3L3P0CL85 134 aa11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 KCNRGQ8N5I3 272 aa11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 Q8TAT8 98 aa11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 RNASE8Q8TDE3 154 aaKnown RBP11.03□□□□□ -0.64
AC009088.3-201ENST00000563605 A0A0D9SG52 128 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 PGPA6NDG6 321 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 SNURFLB1AK76 121 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 PFDN1O60925 122 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 ZNF138P52744 262 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 OR11H4Q8NGC9 324 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 FAM210BQ96KR6 192 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 FAM19A4Q96LR4 140 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 CYTL1Q9NRR1 136 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 ZNF492Q9P255 531 aa11.02□□□□□ -0.65
AC009088.3-201ENST00000563605 EPPK1P58107 5090 aaKnown RBP11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 RBAKDNA6NC62 111 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 CBY3A6NI87 242 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 KLLNB2CW77 178 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 BCL2L11O43521 198 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 P0DMU3 169 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 FAM231AP0DMU4 169 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 FAM231CP0DMU5 169 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 GCHFRP30047 84 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 PRR9Q5T870 116 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 Q6ZNX1 250 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 Q6ZQT7 251 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 PYGO2Q9BRQ0 406 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 ZNF471Q9BX82 626 aaPredicted RBP11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 TMEM167BQ9NRX6 74 aa11.01□□□□□ -0.65
AC009088.3-201ENST00000563605 VPS13DQ5THJ4 4388 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 hCG_2014768A0A024R1R8 64 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 CTXND1A0A1B0GTU2 59 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 GAGE12BA1L429 117 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 DIRC3C9JPN6 131 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 ZNF324O75467 553 aaPredicted RBP11□□□□□ -0.65
AC009088.3-201ENST00000563605 GAGE7O76087 117 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 ATP5G1P05496 136 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 GAGE12FP0CL80 117 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 GAGE12GP0CL81 117 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 GAGE12IP0CL82 117 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 CRISP2P16562 243 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 ATP5G3P48201 142 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 UBE2DNLQ8IWF7 75 aa11□□□□□ -0.65
AC009088.3-201ENST00000563605 ZFAND2AQ8N6M9 145 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms