RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 OR5I1Q13606 314 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 FAM167A-AS1Q96KT0 104 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 WDR61Q9GZS3 305 aaKnown RBP10.99□□□□□ -0.65
SF3B3-203ENST00000562874 SLC25A31Q9H0C2 315 aa10.99□□□□□ -0.65
SF3B3-203ENST00000562874 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 PRAF2O60831 178 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 PRR9Q5T870 116 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 C1orf134Q5TEV5 83 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 Q6ZTI0 123 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 ZNRF2Q8NHG8 242 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 PPP1R1CQ8WVI7 109 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 PHYHIPLQ96FC7 376 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 PYGO2Q9BRQ0 406 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 TMPRSS5Q9H3S3 457 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 LINC00588Q9Y4M8 146 aa10.98□□□□□ -0.65
SF3B3-203ENST00000562874 EIF3GO75821 320 aaKnown RBP eCLIP10.97□□□□□ -0.65
SF3B3-203ENST00000562874 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
SF3B3-203ENST00000562874 PDE6HQ13956 83 aa10.97□□□□□ -0.65
SF3B3-203ENST00000562874 Q6ZQT7 251 aa10.97□□□□□ -0.65
SF3B3-203ENST00000562874 ZNF575Q86XF7 245 aa10.97□□□□□ -0.65
SF3B3-203ENST00000562874 Q8TAT8 98 aa10.97□□□□□ -0.65
SF3B3-203ENST00000562874 VGLL1Q99990 258 aa10.97□□□□□ -0.65
SF3B3-203ENST00000562874 SMIM3Q9BZL3 60 aa10.97□□□□□ -0.65
SF3B3-203ENST00000562874 GSN-AS1Q9NRJ2 163 aa10.97□□□□□ -0.65
SF3B3-203ENST00000562874 PRELID1Q9Y255 219 aa10.97□□□□□ -0.65
SF3B3-203ENST00000562874 KLLNB2CW77 178 aa10.96□□□□□ -0.65
SF3B3-203ENST00000562874 SSNA1O43805 119 aa10.96□□□□□ -0.65
SF3B3-203ENST00000562874 RNASE4P34096 147 aaKnown RBP10.96□□□□□ -0.65
SF3B3-203ENST00000562874 CCL18P55774 89 aa10.96□□□□□ -0.65
SF3B3-203ENST00000562874 SOHLH1Q5JUK2 328 aa10.96□□□□□ -0.65
SF3B3-203ENST00000562874 FXYD5Q96DB9 178 aa10.96□□□□□ -0.65
SF3B3-203ENST00000562874 GNPNAT1Q96EK6 184 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-203ENST00000562874 FAM19A4Q96LR4 140 aa10.96□□□□□ -0.65
SF3B3-203ENST00000562874 PAXXQ9BUH6 204 aa10.96□□□□□ -0.65
SF3B3-203ENST00000562874 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.65
SF3B3-203ENST00000562874 OR51M1Q9H341 326 aa10.96□□□□□ -0.65
SF3B3-203ENST00000562874 NBDYA0A0U1RRE5 68 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 OR7C2O60412 319 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 NBEAP1P0C6P0 100 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 FAM3BP58499 235 aaPredicted RBP10.95□□□□□ -0.66
SF3B3-203ENST00000562874 SSX7Q7RTT5 188 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 C11orf72Q8NBR9 251 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 ATP5SQ99766 215 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 MARVELD1Q9BSK0 173 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 KCNIP2Q9NS61 270 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 FUT9Q9Y231 359 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 HSPB11Q9Y547 144 aa10.95□□□□□ -0.66
SF3B3-203ENST00000562874 MPC2O95563 127 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 GPX1P07203 203 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 M6PRP20645 277 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 UBE2L3P68036 154 aaKnown RBP10.94□□□□□ -0.66
SF3B3-203ENST00000562874 CYCSP99999 105 aaKnown RBP10.94□□□□□ -0.66
SF3B3-203ENST00000562874 FFAR4Q5NUL3 377 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 TMEM78Q5T7P6 136 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 C9orf47Q6ZRZ4 202 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 ZFAND2AQ8N6M9 145 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 ZNF503Q96F45 646 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 MBD2Q9UBB5 411 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 TP53TG3Q9ULZ0 132 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 KLF12Q9Y4X4 402 aa10.94□□□□□ -0.66
SF3B3-203ENST00000562874 TRGV1A0A0A0MS02 117 aa10.93□□□□□ -0.66
SF3B3-203ENST00000562874 C17orf112F2Z3M2 114 aa10.93□□□□□ -0.66
SF3B3-203ENST00000562874 ZNF324O75467 553 aaPredicted RBP10.93□□□□□ -0.66
SF3B3-203ENST00000562874 CRISP2P16562 243 aa10.93□□□□□ -0.66
SF3B3-203ENST00000562874 TNP2Q05952 138 aa10.93□□□□□ -0.66
SF3B3-203ENST00000562874 EIF4E3Q8N5X7 224 aaKnown RBP10.93□□□□□ -0.66
SF3B3-203ENST00000562874 ZNF680Q8NEM1 530 aa10.93□□□□□ -0.66
SF3B3-203ENST00000562874 RXFP4Q8TDU9 374 aa10.93□□□□□ -0.66
SF3B3-203ENST00000562874 TRGV2A0A075B6R0 118 aa10.92□□□□□ -0.66
SF3B3-203ENST00000562874 DEFA1P59665 94 aa10.92□□□□□ -0.66
SF3B3-203ENST00000562874 DEFA3P59666 94 aa10.92□□□□□ -0.66
SF3B3-203ENST00000562874 DAZ2Q13117 558 aaKnown RBP10.92□□□□□ -0.66
SF3B3-203ENST00000562874 KRTAP1-5Q9BYS1 174 aa10.92□□□□□ -0.66
SF3B3-203ENST00000562874 MRPL16Q9NX20 251 aaKnown RBP10.92□□□□□ -0.66
SF3B3-203ENST00000562874 ZNF492Q9P255 531 aa10.92□□□□□ -0.66
SF3B3-203ENST00000562874 RGS13O14921 159 aa10.91□□□□□ -0.66
SF3B3-203ENST00000562874 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
SF3B3-203ENST00000562874 PET100P0DJ07 73 aa10.91□□□□□ -0.66
SF3B3-203ENST00000562874 RPL12P30050 165 aaKnown RBP10.91□□□□□ -0.66
SF3B3-203ENST00000562874 TCL1AP56279 114 aa10.91□□□□□ -0.66
SF3B3-203ENST00000562874 RANP62826 216 aaKnown RBP10.91□□□□□ -0.66
SF3B3-203ENST00000562874 C6orf223Q8N319 242 aa10.91□□□□□ -0.66
SF3B3-203ENST00000562874 Q9H3A6 140 aa10.91□□□□□ -0.66
SF3B3-203ENST00000562874 RPH3ALQ9UNE2 315 aa10.91□□□□□ -0.66
SF3B3-203ENST00000562874 MED14OSP0DP75 135 aa10.9□□□□□ -0.66
SF3B3-203ENST00000562874 ANXA2RQ3ZCQ2 193 aa10.9□□□□□ -0.66
SF3B3-203ENST00000562874 KHDC3LQ587J8 217 aa10.9□□□□□ -0.66
SF3B3-203ENST00000562874 MUC21Q5SSG8 566 aa10.9□□□□□ -0.66
SF3B3-203ENST00000562874 VSIG2Q96IQ7 327 aa10.9□□□□□ -0.66
SF3B3-203ENST00000562874 ARPC5LQ9BPX5 153 aa10.9□□□□□ -0.66
SF3B3-203ENST00000562874 LINC00467Q9BRT7 94 aa10.9□□□□□ -0.66
SF3B3-203ENST00000562874 WFDC1Q9HC57 220 aa10.9□□□□□ -0.66
SF3B3-203ENST00000562874 IGHV1OR15-1A0A075B7D0 117 aa10.89□□□□□ -0.67
SF3B3-203ENST00000562874 IFNA5P01569 189 aa10.89□□□□□ -0.67
SF3B3-203ENST00000562874 ZNF138P52744 262 aa10.89□□□□□ -0.67
SF3B3-203ENST00000562874 ESRGQ1W209 222 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms