RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 OR10P1Q8NGE3 313 aa7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 Q8TAT8 98 aa7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 ZNF479Q96JC4 524 aa7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 ST6GAL2Q96JF0 529 aa7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 LINC00477Q96M19 166 aa7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 VGLL1Q99990 258 aa7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 AGPAT4-IT1Q9H0P7 198 aa7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 RCL1Q9Y2P8 373 aaKnown RBP7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 PXMP4Q9Y6I8 212 aa7.86□□□□□ -1.15
NSMCE1-202ENST00000561960 PSCAO43653 123 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 SLC25A5P05141 298 aaKnown RBP7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 GPX1P07203 203 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 GYPEP15421 78 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 TCL1AP56279 114 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 FAM122CQ6P4D5 195 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 NEGR1Q7Z3B1 354 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 ZNF680Q8NEM1 530 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 SMIM8Q96KF7 97 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 SLIRPQ9GZT3 109 aaKnown RBP7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 PRO0255Q9UI72 69 aa7.85□□□□□ -1.15
NSMCE1-202ENST00000561960 IGHV3-16A0A0C4DH30 117 aa7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 LECT2O14960 151 aa7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 CST7O76096 145 aa7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 NDUFB4O95168 129 aa7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 SRIP30626 198 aa7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 IAH1Q2TAA2 248 aaPredicted RBP7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 GCSAMLQ5JQS6 135 aa7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 NRARPQ7Z6K4 114 aa7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 V9GYH0 126 aa7.84□□□□□ -1.15
NSMCE1-202ENST00000561960 UBE2L5PA0A1B0GUS4 154 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 KLLNB2CW77 178 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 K7EPK0 472 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 MPDU1O75352 247 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 MBPP02686 304 aaPredicted RBP7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 EVI2AP22794 236 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 CAMLGP49069 296 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 WFDC2Q14508 124 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 MRPL23Q16540 153 aaKnown RBP7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 S100A7AQ86SG5 101 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 ODF3Q96PU9 254 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 ARPC5LQ9BPX5 153 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 MRPS26Q9BYN8 205 aaKnown RBP7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 DNAJC4Q9NNZ3 241 aa7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 LSM5Q9Y4Y9 91 aaKnown RBP7.83□□□□□ -1.16
NSMCE1-202ENST00000561960 TRBV19A0A075B6N1 114 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 IGHV1OR15-1A0A075B7D0 117 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 TRAV9-2A0A087WT02 112 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 C7orf66A4D0T2 115 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 LRCOL1A6NCL2 159 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 H3BMQ9 156 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 IGHV3-30P01768 117 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 IGHV3-33P01772 117 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 IGHV3-30-3P0DP02 117 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 IGHV3-30-5P0DP03 117 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 BCAP31P51572 246 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 ANXA2RQ3ZCQ2 193 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 C4orf46Q504U0 113 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 LINC00528Q8N1L1 170 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 Q8N3U1 123 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 ZFAND2AQ8N6M9 145 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 PCNPQ8WW12 178 aaKnown RBP7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 FAM19A4Q96LR4 140 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 TIMM9Q9Y5J7 89 aa7.82□□□□□ -1.16
NSMCE1-202ENST00000561960 FAM24AA6NFZ4 105 aa7.81□□□□□ -1.16
NSMCE1-202ENST00000561960 FAM25EA8MYX2 175 aa7.81□□□□□ -1.16
NSMCE1-202ENST00000561960 TSC22D2O75157 780 aa7.81□□□□□ -1.16
NSMCE1-202ENST00000561960 AP3S2P59780 193 aa7.81□□□□□ -1.16
NSMCE1-202ENST00000561960 Q8N814 137 aa7.81□□□□□ -1.16
NSMCE1-202ENST00000561960 NHLRC2Q8NBF2 726 aa7.81□□□□□ -1.16
NSMCE1-202ENST00000561960 SLC25A21Q9BQT8 299 aaPredicted RBP7.81□□□□□ -1.16
NSMCE1-202ENST00000561960 NAGKQ9UJ70 344 aa7.81□□□□□ -1.16
NSMCE1-202ENST00000561960 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 PIGBOS1A0A0B4J2F0 54 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 CAV2P51636 162 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 BAXQ07812 192 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 TMEM183BQ1AE95 376 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 PXDC1Q5TGL8 231 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 Q6ZRG5 221 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 TMEM183AQ8IXX5 376 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 TMEM70Q9BUB7 260 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 MRPL32Q9BYC8 188 aaKnown RBP7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 SLC25A31Q9H0C2 315 aa7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 RABL2AQ9UBK7 228 aaPredicted RBP7.8□□□□□ -1.16
NSMCE1-202ENST00000561960 FNDC10F2Z333 226 aa7.79□□□□□ -1.16
NSMCE1-202ENST00000561960 L7N2F9 121 aa7.79□□□□□ -1.16
NSMCE1-202ENST00000561960 EIF3GO75821 320 aaKnown RBP eCLIP7.79□□□□□ -1.16
NSMCE1-202ENST00000561960 OR10J4P0C629 311 aa7.79□□□□□ -1.16
NSMCE1-202ENST00000561960 VAMP2P63027 116 aa7.79□□□□□ -1.16
NSMCE1-202ENST00000561960 TMEM78Q5T7P6 136 aa7.79□□□□□ -1.16
NSMCE1-202ENST00000561960 SLC25A2Q9BXI2 301 aa7.79□□□□□ -1.16
NSMCE1-202ENST00000561960 SLC39A9Q9NUM3 307 aa7.79□□□□□ -1.16
NSMCE1-202ENST00000561960 IGHV3-73A0A0B4J1V6 119 aa7.78□□□□□ -1.16
NSMCE1-202ENST00000561960 NDUFB6O95139 128 aa7.78□□□□□ -1.16
NSMCE1-202ENST00000561960 FGF7P21781 194 aa7.78□□□□□ -1.16
NSMCE1-202ENST00000561960 PPT1P50897 306 aa7.78□□□□□ -1.16
NSMCE1-202ENST00000561960 GUK1Q16774 197 aa7.78□□□□□ -1.16
NSMCE1-202ENST00000561960 IBA57Q5T440 356 aaKnown RBP7.78□□□□□ -1.16
NSMCE1-202ENST00000561960 MIR17HGQ75NE6 70 aa7.78□□□□□ -1.16
NSMCE1-202ENST00000561960 OR1L4Q8NGR5 311 aa7.78□□□□□ -1.16
NSMCE1-202ENST00000561960 PHYHIPLQ96FC7 376 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms