RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 CITED4Q96RK1 184 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 DERL1Q9BUN8 251 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 TREM1Q9NP99 234 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 KLF12Q9Y4X4 402 aa9.36□□□□□ -0.91
CMTM4-203ENST00000561680 TRAV34A0A0B4J273 112 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 TRBV6-1A0A0K0K1D8 114 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 FBLL1A6NHQ2 334 aaKnown RBP9.35□□□□□ -0.91
CMTM4-203ENST00000561680 DUSP14O95147 198 aaKnown RBP9.35□□□□□ -0.91
CMTM4-203ENST00000561680 FLI1Q01543 452 aaPredicted RBP9.35□□□□□ -0.91
CMTM4-203ENST00000561680 ERCC8Q13216 396 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 TMEM183BQ1AE95 376 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 TMEM78Q5T7P6 136 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 Q86TA4 180 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 DEFB125Q8N687 156 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 LINC00477Q96M19 166 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 CLUHP3Q96NS8 147 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 SLC35B3Q9H1N7 401 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 PPP1R14DQ9NXH3 145 aa9.35□□□□□ -0.91
CMTM4-203ENST00000561680 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.91
CMTM4-203ENST00000561680 RPL35P42766 123 aaKnown RBP9.34□□□□□ -0.91
CMTM4-203ENST00000561680 UBE2G1P62253 170 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 NDUFA5Q16718 116 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 TRPT1Q86TN4 253 aaKnown RBP9.34□□□□□ -0.91
CMTM4-203ENST00000561680 STHQ8IWL8 128 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 Q8TAT8 98 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 SGK494Q96LW2 274 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 ODF3Q96PU9 254 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 PARLQ9H300 379 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 ZNF492Q9P255 531 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 PSG8Q9UQ74 426 aa9.34□□□□□ -0.91
CMTM4-203ENST00000561680 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
CMTM4-203ENST00000561680 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
CMTM4-203ENST00000561680 LTAP01374 205 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 SFTA3P0C7M3 94 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
CMTM4-203ENST00000561680 CT45A10P0DMU9 189 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 ZNF138P52744 262 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 CEBPGP53567 150 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 TAS2R60P59551 318 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 AMTNQ6UX39 209 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 OR4B1Q8NGF8 309 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 FAM19A4Q96LR4 140 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 IGF2BP2-AS1Q96M15 143 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
CMTM4-203ENST00000561680 TRBV20OR9-2A0A075B6H5 130 aa9.32□□□□□ -0.92
CMTM4-203ENST00000561680 TRBV7-9A0A0J9YWB2 115 aa9.32□□□□□ -0.92
CMTM4-203ENST00000561680 C9JCJ5 164 aa9.32□□□□□ -0.92
CMTM4-203ENST00000561680 PRNTQ86SH4 94 aa9.32□□□□□ -0.92
CMTM4-203ENST00000561680 TVP23CQ96ET8 276 aa9.32□□□□□ -0.92
CMTM4-203ENST00000561680 SMIM7Q9BQ49 75 aa9.32□□□□□ -0.92
CMTM4-203ENST00000561680 AURKAIP1Q9NWT8 199 aaPredicted RBP9.32□□□□□ -0.92
CMTM4-203ENST00000561680 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 IGHV4-30-4P0DP06 118 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 CRISP2P16562 243 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 ZNF674Q2M3X9 581 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 FAM74A3Q4VXF1 159 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 CENPWQ5EE01 88 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 SOHLH1Q5JUK2 328 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 SLC7A5P1Q8MH63 180 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 ASCL2Q99929 193 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 NDFIP1Q9BT67 221 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
CMTM4-203ENST00000561680 TMEM218A2RU14 115 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 ZNF727A8MUV8 499 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 A8MZ25 164 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 IGLV2-8P01709 118 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
CMTM4-203ENST00000561680 LEPP41159 167 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 GNG4P50150 75 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 SAPCD1Q5SSQ6 148 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 BAGE2Q86Y30 109 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 TMEM183AQ8IXX5 376 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 ZFAND2AQ8N6M9 145 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 SMIM12Q96EX1 92 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 C8orf49Q96NF6 230 aa9.3□□□□□ -0.92
CMTM4-203ENST00000561680 KLLNB2CW77 178 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 M0R2Z0 102 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 ADCYAP1P18509 176 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 TSPOP30536 169 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 CDKN1BP46527 198 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 PRR9Q5T870 116 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 MORN3Q6PF18 240 aaPredicted RBP9.29□□□□□ -0.92
CMTM4-203ENST00000561680 COX8CQ7Z4L0 72 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 MLST8Q9BVC4 326 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 TUBA4BQ9H853 241 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 LY96Q9Y6Y9 160 aa9.29□□□□□ -0.92
CMTM4-203ENST00000561680 LOC102724200A0A096LPH7 203 aaPredicted RBP9.28□□□□□ -0.92
CMTM4-203ENST00000561680 PGPEP1LA6NFU8 196 aa9.28□□□□□ -0.92
CMTM4-203ENST00000561680 K7EIL1 84 aa9.28□□□□□ -0.92
CMTM4-203ENST00000561680 PRB2P02812 416 aaPredicted RBP9.28□□□□□ -0.92
CMTM4-203ENST00000561680 NUTF2P61970 127 aaKnown RBP9.28□□□□□ -0.92
CMTM4-203ENST00000561680 LINC00322Q6ZN03 302 aaPredicted RBP9.28□□□□□ -0.92
CMTM4-203ENST00000561680 NHLRC2Q8NBF2 726 aa9.28□□□□□ -0.92
CMTM4-203ENST00000561680 KIR2DL5BA0A0G2JN68 375 aa9.27□□□□□ -0.93
CMTM4-203ENST00000561680 KIR2DL5BA0A0G2JPC4 375 aa9.27□□□□□ -0.93
CMTM4-203ENST00000561680 CRXO43186 299 aaPredicted RBP9.27□□□□□ -0.93
CMTM4-203ENST00000561680 AMBPP02760 352 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms