RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 DEFB130BP0DP73 79 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 DEFB130AP0DP74 79 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 AZU1P20160 251 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 C12orf74Q32Q52 190 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 FAM74A1Q5RGS3 127 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 AKR1C8PQ5T2L2 129 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 GFI1BQ5VTD9 330 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 CCDC28AQ8IWP9 274 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 Q8TAT8 98 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 C2CD4CQ8TF44 421 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 RAB24Q969Q5 203 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 GNPNAT1Q96EK6 184 aaPredicted RBP7.27□□□□□ -1.25
HERC1-212ENST00000561348 MRPL53Q96EL3 112 aaKnown RBP7.27□□□□□ -1.25
HERC1-212ENST00000561348 NEU1Q99519 415 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 NIPSNAP3BQ9BS92 247 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 PSMG3Q9BT73 122 aaPredicted RBP7.27□□□□□ -1.25
HERC1-212ENST00000561348 ACTR3CQ9C0K3 210 aaPredicted RBP7.27□□□□□ -1.25
HERC1-212ENST00000561348 AGPAT4-IT1Q9H0P7 198 aa7.27□□□□□ -1.25
HERC1-212ENST00000561348 DNAH7Q8WXX0 4024 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 DEFB131BA0A096LNP1 70 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 TRAV10A0A0B4J240 114 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 LCE6AA0A183 80 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 A8MTW9 85 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 G3V3Q6 166 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 TAAR5O14804 337 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 SLC25A5P05141 298 aaKnown RBP7.26□□□□□ -1.25
HERC1-212ENST00000561348 DAD1P61803 113 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 BTN1A1Q13410 526 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 PQLC2Q6ZP29 291 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 ARPC5LQ9BPX5 153 aa7.26□□□□□ -1.25
HERC1-212ENST00000561348 ZNF471Q9BX82 626 aaPredicted RBP7.26□□□□□ -1.25
HERC1-212ENST00000561348 A0A1B0GV50 99 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 KANTRA0A1W2PQU2 76 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 C7orf71A4D174 169 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 C11orf94C9JXX5 98 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 H7BYZ3 331 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 FGF8P55075 233 aaPredicted RBP7.25□□□□□ -1.25
HERC1-212ENST00000561348 TAS2R60P59551 318 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 UBE2G2P60604 165 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 GNG5P63218 68 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 SERF2P84101 59 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 GOLT1AQ6ZVE7 132 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 TMEM256Q8N2U0 113 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 OR11H4Q8NGC9 324 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 SGK494Q96LW2 274 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 FAM210AQ96ND0 272 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 OTORQ9NRC9 128 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 DKK2Q9UBU2 259 aa7.25□□□□□ -1.25
HERC1-212ENST00000561348 CSMD3Q7Z407 3707 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 CBY3A6NI87 242 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 RGS13O14921 159 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 CXorf1O96002 111 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 GCHFRP30047 84 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 ZNF138P52744 262 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 ZFP69Q49AA0 526 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 C9orf47Q6ZRZ4 202 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 SSX7Q7RTT5 188 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 LYPD1Q8N2G4 141 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 RXFP4Q8TDU9 374 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 ST6GAL2Q96JF0 529 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 TMPRSS5Q9H3S3 457 aa7.24□□□□□ -1.25
HERC1-212ENST00000561348 NOP10Q9NPE3 64 aaKnown RBP7.24□□□□□ -1.25
HERC1-212ENST00000561348 IGHV4-4A0A075B6R2 117 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 A0A0D9SG52 128 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 SNURFLB1AK76 121 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 DIRC3C9JPN6 131 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 ATP6V1G1O75348 118 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 IFNA7P01567 189 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 STAG3L2P0CL84 134 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 STAG3L3P0CL85 134 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 SUMO1P63165 101 aaKnown RBP7.23□□□□□ -1.25
HERC1-212ENST00000561348 MUC21Q5SSG8 566 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 KCNRGQ8N5I3 272 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 C16orf74Q96GX8 76 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 CYTL1Q9NRR1 136 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 ZNF492Q9P255 531 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 NAGKQ9UJ70 344 aa7.23□□□□□ -1.25
HERC1-212ENST00000561348 TRAV8-1A0A0A6YYK1 113 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 CTXND1A0A1B0GTU2 59 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 TEX48A0A1B0GUV7 120 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 GAGE12BA1L429 117 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 F5H768 121 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 GAGE7O76087 117 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 GAGE12FP0CL80 117 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 GAGE12GP0CL81 117 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 GAGE12IP0CL82 117 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 PRR9Q5T870 116 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 Q6ZQT7 251 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 TMUB2Q71RG4 321 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 TCTE3Q8IZS6 198 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 FAM213BQ8TBF2 198 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 ODF3Q96PU9 254 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 C20orf144Q9BQM9 153 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 TMEM167BQ9NRX6 74 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 TIMM8BQ9Y5J9 83 aaPredicted RBP7.22□□□□□ -1.25
HERC1-212ENST00000561348 STARD9Q9P2P6 4700 aa7.22□□□□□ -1.25
HERC1-212ENST00000561348 MAP1LC3B2A6NCE7 125 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 HMSDA8MTL9 139 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 F6UZH7 168 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms