RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZFAND2AQ8N6M9 145 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 Q8TAT8 98 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 GNPNAT1Q96EK6 184 aaPredicted RBP9.91□□□□□ -0.82
TPM1-230ENST00000561266 LINC01587Q99440 93 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 TMEM208Q9BTX3 173 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 DKK2Q9UBU2 259 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 YTHDF2Q9Y5A9 579 aaKnown RBP9.91□□□□□ -0.82
TPM1-230ENST00000561266 RYR2Q92736 4967 aa9.91□□□□□ -0.82
TPM1-230ENST00000561266 TRAV12-3A0A0B4J271 114 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 A0A1B0GVG6 124 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 KLLNB2CW77 178 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 DIRC3C9JPN6 131 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 TAAR5O14804 337 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 JTBO76095 146 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 HTN1P15515 57 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 GNG5P63218 68 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 BTN1A1Q13410 526 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 ZNF345Q14585 488 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 LYPD1Q8N2G4 141 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 HYLS1Q96M11 299 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 LINC00477Q96M19 166 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 ODF3Q96PU9 254 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 ARPC5LQ9BPX5 153 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 TMPRSS5Q9H3S3 457 aa9.9□□□□□ -0.82
TPM1-230ENST00000561266 ZNF324O75467 553 aaPredicted RBP9.89□□□□□ -0.83
TPM1-230ENST00000561266 LEPP41159 167 aa9.89□□□□□ -0.83
TPM1-230ENST00000561266 FHITP49789 147 aa9.89□□□□□ -0.83
TPM1-230ENST00000561266 ACTR3CQ9C0K3 210 aaPredicted RBP9.89□□□□□ -0.83
TPM1-230ENST00000561266 OTORQ9NRC9 128 aa9.89□□□□□ -0.83
TPM1-230ENST00000561266 ZNF492Q9P255 531 aa9.89□□□□□ -0.83
TPM1-230ENST00000561266 HYDINQ4G0P3 5121 aa9.89□□□□□ -0.83
TPM1-230ENST00000561266 MBP02144 154 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 SPART-AS1P0CW21 52 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 CRISP2P16562 243 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 TSPOP30536 169 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 FGF8P55075 233 aaPredicted RBP9.88□□□□□ -0.83
TPM1-230ENST00000561266 TAS2R60P59551 318 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 LGALSLQ3ZCW2 172 aaPredicted RBP9.88□□□□□ -0.83
TPM1-230ENST00000561266 TMUB2Q71RG4 321 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 TCTE3Q8IZS6 198 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 TVP23CQ96ET8 276 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 RPH3ALQ9UNE2 315 aa9.88□□□□□ -0.83
TPM1-230ENST00000561266 TRAV8-1A0A0A6YYK1 113 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 A0A0D9SG52 128 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 C7orf71A4D174 169 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 TMEM189A5PLL7 270 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 BCL2L11O43521 198 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 RNASE4P34096 147 aaKnown RBP9.87□□□□□ -0.83
TPM1-230ENST00000561266 ZNF138P52744 262 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 TMEM256Q8N2U0 113 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 RNASE8Q8TDE3 154 aaKnown RBP9.87□□□□□ -0.83
TPM1-230ENST00000561266 SGK494Q96LW2 274 aa9.87□□□□□ -0.83
TPM1-230ENST00000561266 CTXND1A0A1B0GTU2 59 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 RBAKDNA6NC62 111 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 H7BYZ3 331 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 CXorf1O96002 111 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 SLC25A5P05141 298 aaKnown RBP9.86□□□□□ -0.83
TPM1-230ENST00000561266 AKR1C8PQ5T2L2 129 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 TMEM78Q5T7P6 136 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 GOLT1AQ6ZVE7 132 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 C20orf144Q9BQM9 153 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 NIPSNAP3BQ9BS92 247 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 ZNF471Q9BX82 626 aaPredicted RBP9.86□□□□□ -0.83
TPM1-230ENST00000561266 TP53TG3Q9ULZ0 132 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 APLNQ9ULZ1 77 aa9.86□□□□□ -0.83
TPM1-230ENST00000561266 KMT2AQ03164 3969 aa9.85□□□□□ -0.83
TPM1-230ENST00000561266 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
TPM1-230ENST00000561266 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
TPM1-230ENST00000561266 IGLL5B9A064 214 aa9.85□□□□□ -0.83
TPM1-230ENST00000561266 CSN1S1P47710 185 aa9.85□□□□□ -0.83
TPM1-230ENST00000561266 C2CD4CQ8TF44 421 aa9.85□□□□□ -0.83
TPM1-230ENST00000561266 LINC00476Q8WZB0 136 aa9.85□□□□□ -0.83
TPM1-230ENST00000561266 KLK5Q9Y337 293 aaPredicted RBP9.85□□□□□ -0.83
TPM1-230ENST00000561266 VPS13DQ5THJ4 4388 aa9.84□□□□□ -0.83
TPM1-230ENST00000561266 C11orf94C9JXX5 98 aa9.84□□□□□ -0.83
TPM1-230ENST00000561266 GPX1P07203 203 aa9.84□□□□□ -0.83
TPM1-230ENST00000561266 SUMO1P63165 101 aaKnown RBP9.84□□□□□ -0.83
TPM1-230ENST00000561266 RXFP4Q8TDU9 374 aa9.84□□□□□ -0.83
TPM1-230ENST00000561266 NOP10Q9NPE3 64 aaKnown RBP9.84□□□□□ -0.83
TPM1-230ENST00000561266 IGHV4-4A0A075B6R2 117 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 KANTRA0A1W2PQU2 76 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 IGLV2-11P01706 119 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 C1QBP02746 253 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 SEC11BP0C7V7 166 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 UBE2G2P60604 165 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 IQCF2Q8IXL9 164 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 C11orf72Q8NBR9 251 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 CMTM2Q8TAZ6 248 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
TPM1-230ENST00000561266 TMED6Q8WW62 240 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 C16orf74Q96GX8 76 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 TMEM167BQ9NRX6 74 aa9.83□□□□□ -0.84
TPM1-230ENST00000561266 MAP1LC3B2A6NCE7 125 aa9.82□□□□□ -0.84
TPM1-230ENST00000561266 TCRAP04437 139 aa9.82□□□□□ -0.84
TPM1-230ENST00000561266 NMBP08949 121 aa9.82□□□□□ -0.84
TPM1-230ENST00000561266 DEFB130BP0DP73 79 aa9.82□□□□□ -0.84
TPM1-230ENST00000561266 DEFB130AP0DP74 79 aa9.82□□□□□ -0.84
TPM1-230ENST00000561266 HTN3P15516 51 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms