RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 RANP62826 216 aaKnown RBP11.33□□□□□ -0.6
LMX1B-204ENST00000561065 OR10G4Q8NGN3 311 aa11.33□□□□□ -0.6
LMX1B-204ENST00000561065 OR10G9Q8NGN4 311 aa11.33□□□□□ -0.6
LMX1B-204ENST00000561065 OR10G7Q8NGN6 311 aa11.33□□□□□ -0.6
LMX1B-204ENST00000561065 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
LMX1B-204ENST00000561065 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
LMX1B-204ENST00000561065 NDUFAF3Q9BU61 184 aa11.33□□□□□ -0.6
LMX1B-204ENST00000561065 NACAE9PAV3 2078 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 DYNC1H1Q14204 4646 aaKnown RBP11.32□□□□□ -0.6
LMX1B-204ENST00000561065 FXYD6-FXYD2A0A087WZ82 144 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 PLAC8L1A1L4L8 177 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 PRAC2D3DTV9 90 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 C9orf47Q6ZRZ4 202 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 EXOC3-AS1Q8N2X6 119 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 ARL6IP6Q8N6S5 226 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 OR2G3Q8NGZ4 309 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 WFDC1Q9HC57 220 aa11.32□□□□□ -0.6
LMX1B-204ENST00000561065 TIMM8BQ9Y5J9 83 aaPredicted RBP11.32□□□□□ -0.6
LMX1B-204ENST00000561065 PKD1P98161 4303 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 TRBV7-9A0A0J9YWB2 115 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 RBAKDNA6NC62 111 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 M0R3E3 92 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 GPX1P07203 203 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 FAM122CQ6P4D5 195 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 HSD17B11Q8NBQ5 300 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 PYGO2Q9BRQ0 406 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 TNFSF18Q9UNG2 199 aa11.31□□□□□ -0.6
LMX1B-204ENST00000561065 HTN3P15516 51 aa11.3□□□□□ -0.6
LMX1B-204ENST00000561065 AZU1P20160 251 aa11.3□□□□□ -0.6
LMX1B-204ENST00000561065 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
LMX1B-204ENST00000561065 TMEM263Q8WUH6 116 aaKnown RBP11.3□□□□□ -0.6
LMX1B-204ENST00000561065 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
LMX1B-204ENST00000561065 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
LMX1B-204ENST00000561065 CDC34P49427 236 aaPredicted RBP11.29□□□□□ -0.6
LMX1B-204ENST00000561065 ZNF138P52744 262 aa11.29□□□□□ -0.6
LMX1B-204ENST00000561065 POM121L12Q8N7R1 296 aa11.29□□□□□ -0.6
LMX1B-204ENST00000561065 DNAH11Q96DT5 4516 aa11.29□□□□□ -0.6
LMX1B-204ENST00000561065 AGPAT4-IT1Q9H0P7 198 aa11.29□□□□□ -0.6
LMX1B-204ENST00000561065 Q9H3A6 140 aa11.29□□□□□ -0.6
LMX1B-204ENST00000561065 OTORQ9NRC9 128 aa11.29□□□□□ -0.6
LMX1B-204ENST00000561065 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
LMX1B-204ENST00000561065 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 C7orf71A4D174 169 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 K7EQM0 130 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 P0DMU3 169 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 ATP6V0CP27449 155 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 GFI1BQ5VTD9 330 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 TMEM88Q6PEY1 159 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 TMEM167BQ9NRX6 74 aa11.28□□□□□ -0.6
LMX1B-204ENST00000561065 KIAA1109Q2LD37 5005 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 PGPA6NDG6 321 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 CBY3A6NI87 242 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 J3KRW8 73 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 CRISP2P16562 243 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.61
LMX1B-204ENST00000561065 RAB2AP61019 212 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 ERCC8Q13216 396 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 Q5BKY6 102 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 ZNF680Q8NEM1 530 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 PHYHIPLQ96FC7 376 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 HYLS1Q96M11 299 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
LMX1B-204ENST00000561065 SERTM2A0A1B0GWG4 89 aa11.26□□□□□ -0.61
LMX1B-204ENST00000561065 CXorf1O96002 111 aa11.26□□□□□ -0.61
LMX1B-204ENST00000561065 ATP5G1P05496 136 aa11.26□□□□□ -0.61
LMX1B-204ENST00000561065 DEFB130BP0DP73 79 aa11.26□□□□□ -0.61
LMX1B-204ENST00000561065 DEFB130AP0DP74 79 aa11.26□□□□□ -0.61
LMX1B-204ENST00000561065 ATP5G3P48201 142 aa11.26□□□□□ -0.61
LMX1B-204ENST00000561065 TMED6Q8WW62 240 aa11.26□□□□□ -0.61
LMX1B-204ENST00000561065 KLLNB2CW77 178 aa11.25□□□□□ -0.61
LMX1B-204ENST00000561065 ARPC5O15511 151 aa11.25□□□□□ -0.61
LMX1B-204ENST00000561065 STAG3L2P0CL84 134 aa11.25□□□□□ -0.61
LMX1B-204ENST00000561065 STAG3L3P0CL85 134 aa11.25□□□□□ -0.61
LMX1B-204ENST00000561065 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
LMX1B-204ENST00000561065 EIF4E3Q8N5X7 224 aaKnown RBP11.25□□□□□ -0.61
LMX1B-204ENST00000561065 RAB24Q969Q5 203 aa11.25□□□□□ -0.61
LMX1B-204ENST00000561065 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
LMX1B-204ENST00000561065 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
LMX1B-204ENST00000561065 IGKV2-40A0A087WW87 121 aaPredicted RBP11.24□□□□□ -0.61
LMX1B-204ENST00000561065 A0A0D9SG52 128 aa11.24□□□□□ -0.61
LMX1B-204ENST00000561065 RNF222A6NCQ9 220 aa11.24□□□□□ -0.61
LMX1B-204ENST00000561065 DIRC3C9JPN6 131 aa11.24□□□□□ -0.61
LMX1B-204ENST00000561065 M0R2N4 97 aa11.24□□□□□ -0.61
LMX1B-204ENST00000561065 RGS13O14921 159 aa11.24□□□□□ -0.61
LMX1B-204ENST00000561065 IGKV2D-40P01614 121 aaPredicted RBP11.24□□□□□ -0.61
LMX1B-204ENST00000561065 EIF5AP63241 154 aaKnown RBP11.24□□□□□ -0.61
LMX1B-204ENST00000561065 RPL7L1Q6DKI1 246 aaKnown RBP11.24□□□□□ -0.61
LMX1B-204ENST00000561065 C15orf53Q8NAA6 179 aa11.24□□□□□ -0.61
LMX1B-204ENST00000561065 RNASE8Q8TDE3 154 aaKnown RBP11.24□□□□□ -0.61
LMX1B-204ENST00000561065 NOP10Q9NPE3 64 aaKnown RBP11.24□□□□□ -0.61
LMX1B-204ENST00000561065 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
LMX1B-204ENST00000561065 HMSDA8MTL9 139 aa11.23□□□□□ -0.61
LMX1B-204ENST00000561065 RTL8CO15255 209 aa11.23□□□□□ -0.61
LMX1B-204ENST00000561065 ARL14EPLP0DKL9 152 aa11.23□□□□□ -0.61
LMX1B-204ENST00000561065 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
LMX1B-204ENST00000561065 ST6GAL2Q96JF0 529 aa11.23□□□□□ -0.61
LMX1B-204ENST00000561065 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms