RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CRISP2P16562 243 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 SRIP30626 198 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 TAS2R30P59541 319 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 UBE2MP61081 183 aaKnown RBP12.45□□□□□ -0.42
TPM1-226ENST00000560959 CD300CQ08708 224 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 SPCS2Q15005 226 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 DNAJC4Q9NNZ3 241 aa12.45□□□□□ -0.42
TPM1-226ENST00000560959 FABP12A6NFH5 140 aa12.44□□□□□ -0.42
TPM1-226ENST00000560959 SSSCA1O60232 199 aa12.44□□□□□ -0.42
TPM1-226ENST00000560959 TSC22D2O75157 780 aa12.44□□□□□ -0.42
TPM1-226ENST00000560959 ORM1P02763 201 aa12.44□□□□□ -0.42
TPM1-226ENST00000560959 FAM30AQ9NZY2 134 aa12.44□□□□□ -0.42
TPM1-226ENST00000560959 PRELID1Q9Y255 219 aa12.44□□□□□ -0.42
TPM1-226ENST00000560959 PSCAO43653 123 aa12.43□□□□□ -0.42
TPM1-226ENST00000560959 RNASE4P34096 147 aaKnown RBP12.43□□□□□ -0.42
TPM1-226ENST00000560959 ZNF415Q09FC8 603 aa12.43□□□□□ -0.42
TPM1-226ENST00000560959 BTN1A1Q13410 526 aa12.43□□□□□ -0.42
TPM1-226ENST00000560959 Q6ZRG5 221 aa12.43□□□□□ -0.42
TPM1-226ENST00000560959 TOMM5Q8N4H5 51 aa12.43□□□□□ -0.42
TPM1-226ENST00000560959 Q8N814 137 aa12.43□□□□□ -0.42
TPM1-226ENST00000560959 AGPAT4-IT1Q9H0P7 198 aa12.43□□□□□ -0.42
TPM1-226ENST00000560959 E5RGE8 158 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 RGS13O14921 159 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 GPX1P07203 203 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 TNFSF8P32971 234 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 ERCC8Q13216 396 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 MCFD2Q8NI22 146 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 DYNC2LI1Q8TCX1 351 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 PCNPQ8WW12 178 aaKnown RBP12.42□□□□□ -0.42
TPM1-226ENST00000560959 MGST2Q99735 147 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 TXNDC17Q9BRA2 123 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 MRPL16Q9NX20 251 aaKnown RBP12.42□□□□□ -0.42
TPM1-226ENST00000560959 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
TPM1-226ENST00000560959 TRBV19A0A075B6N1 114 aa12.41□□□□□ -0.42
TPM1-226ENST00000560959 IGHV1OR15-1A0A075B7D0 117 aa12.41□□□□□ -0.42
TPM1-226ENST00000560959 TRAV5A0A0B4J249 113 aa12.41□□□□□ -0.42
TPM1-226ENST00000560959 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
TPM1-226ENST00000560959 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
TPM1-226ENST00000560959 OR1L4Q8NGR5 311 aa12.41□□□□□ -0.42
TPM1-226ENST00000560959 TRIM63Q969Q1 353 aa12.41□□□□□ -0.42
TPM1-226ENST00000560959 C9orf170A2RU37 121 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 M0R3E3 92 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 SMIM18P0DKX4 95 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 TIRAPP58753 221 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 ARL16Q0P5N6 197 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 RAB31Q13636 194 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 PDE6HQ13956 83 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 Q6ZSA8 131 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 SH2D6Q7Z4S9 175 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 C12orf45Q8N5I9 185 aaPredicted RBP12.4□□□□□ -0.42
TPM1-226ENST00000560959 OR10G4Q8NGN3 311 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 ARPC5LQ9BPX5 153 aa12.4□□□□□ -0.42
TPM1-226ENST00000560959 IBA57-AS1B1ANH7 110 aa12.39□□□□□ -0.43
TPM1-226ENST00000560959 GYPEP15421 78 aa12.39□□□□□ -0.43
TPM1-226ENST00000560959 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
TPM1-226ENST00000560959 RASL10AQ92737 203 aa12.39□□□□□ -0.43
TPM1-226ENST00000560959 PFDN5Q99471 154 aa12.39□□□□□ -0.43
TPM1-226ENST00000560959 IGHV3-38A0A0C4DH36 116 aa12.38□□□□□ -0.43
TPM1-226ENST00000560959 CAMLGP49069 296 aa12.38□□□□□ -0.43
TPM1-226ENST00000560959 LINC01556Q5JQF7 62 aa12.38□□□□□ -0.43
TPM1-226ENST00000560959 LINC00528Q8N1L1 170 aa12.38□□□□□ -0.43
TPM1-226ENST00000560959 BCL7BQ9BQE9 202 aa12.38□□□□□ -0.43
TPM1-226ENST00000560959 TMEM14CQ9P0S9 112 aa12.38□□□□□ -0.43
TPM1-226ENST00000560959 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
TPM1-226ENST00000560959 TRBV7-9A0A0J9YWB2 115 aa12.37□□□□□ -0.43
TPM1-226ENST00000560959 C9JCJ5 164 aa12.37□□□□□ -0.43
TPM1-226ENST00000560959 NDUFB4O95168 129 aa12.37□□□□□ -0.43
TPM1-226ENST00000560959 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
TPM1-226ENST00000560959 RAB2BQ8WUD1 216 aa12.37□□□□□ -0.43
TPM1-226ENST00000560959 ZNF479Q96JC4 524 aa12.37□□□□□ -0.43
TPM1-226ENST00000560959 SLIRPQ9GZT3 109 aaKnown RBP12.37□□□□□ -0.43
TPM1-226ENST00000560959 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
TPM1-226ENST00000560959 LRP1Q07954 4544 aaKnown RBP12.36□□□□□ -0.43
TPM1-226ENST00000560959 OXTP01178 125 aa12.36□□□□□ -0.43
TPM1-226ENST00000560959 TMEM78Q5T7P6 136 aa12.36□□□□□ -0.43
TPM1-226ENST00000560959 NRARPQ7Z6K4 114 aa12.36□□□□□ -0.43
TPM1-226ENST00000560959 SPXQ9BT56 116 aa12.36□□□□□ -0.43
TPM1-226ENST00000560959 TIMM9Q9Y5J7 89 aa12.36□□□□□ -0.43
TPM1-226ENST00000560959 C7orf66A4D0T2 115 aa12.35□□□□□ -0.43
TPM1-226ENST00000560959 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
TPM1-226ENST00000560959 PYDC2Q56P42 97 aa12.35□□□□□ -0.43
TPM1-226ENST00000560959 PRR9Q5T870 116 aa12.35□□□□□ -0.43
TPM1-226ENST00000560959 MIC13Q5XKP0 118 aa12.35□□□□□ -0.43
TPM1-226ENST00000560959 ZNF492Q9P255 531 aa12.35□□□□□ -0.43
TPM1-226ENST00000560959 RPL29P47914 159 aaKnown RBP12.34□□□□□ -0.43
TPM1-226ENST00000560959 TMBIM6P55061 237 aa12.34□□□□□ -0.43
TPM1-226ENST00000560959 IAH1Q2TAA2 248 aaPredicted RBP12.34□□□□□ -0.43
TPM1-226ENST00000560959 TDRG1Q3Y452 100 aa12.34□□□□□ -0.43
TPM1-226ENST00000560959 CHAC2Q8WUX2 184 aa12.34□□□□□ -0.43
TPM1-226ENST00000560959 AAMDCQ9H7C9 122 aa12.34□□□□□ -0.43
TPM1-226ENST00000560959 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
TPM1-226ENST00000560959 Q6ZQT7 251 aa12.33□□□□□ -0.44
TPM1-226ENST00000560959 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
TPM1-226ENST00000560959 MRPS26Q9BYN8 205 aaKnown RBP12.33□□□□□ -0.44
TPM1-226ENST00000560959 SLC25A31Q9H0C2 315 aa12.33□□□□□ -0.44
TPM1-226ENST00000560959 C20orf85Q9H1P6 137 aa12.33□□□□□ -0.44
TPM1-226ENST00000560959 WDR83OSQ9Y284 106 aa12.33□□□□□ -0.44
TPM1-226ENST00000560959 TRAV4A0A0B4J268 109 aa12.32□□□□□ -0.44
TPM1-226ENST00000560959 EXOC3-AS1Q8N2X6 119 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms