RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 LEPP41159 167 aa12.09□□□□□ -0.47
TSPAN3-208ENST00000560514 ZNF680Q8NEM1 530 aa12.09□□□□□ -0.47
TSPAN3-208ENST00000560514 CHAC2Q8WUX2 184 aa12.09□□□□□ -0.47
TSPAN3-208ENST00000560514 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
TSPAN3-208ENST00000560514 CCDC32Q9BV29 185 aa12.09□□□□□ -0.47
TSPAN3-208ENST00000560514 PSCAO43653 123 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 COX7A2P2O60397 106 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 ZNF324O75467 553 aaPredicted RBP12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 PVALBP20472 110 aaPredicted RBP12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 S100A11P31949 105 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 CAMLGP49069 296 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 GUK1Q16774 197 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 LYPD5Q6UWN5 251 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 C12orf45Q8N5I9 185 aaPredicted RBP12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 MGST2Q99735 147 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 LINC00467Q9BRT7 94 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 C11orf1Q9H5F2 150 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 GSN-AS1Q9NRJ2 163 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 PXMP4Q9Y6I8 212 aa12.08□□□□□ -0.48
TSPAN3-208ENST00000560514 C5orf51A6NDU8 294 aa12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 BCAP31P51572 246 aa12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 SLAQ13239 276 aa12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 VWC2Q2TAL6 325 aa12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 C10orf113Q5VZT2 155 aa12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 OR1L4Q8NGR5 311 aa12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 NTN5Q8WTR8 489 aaPredicted RBP12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
TSPAN3-208ENST00000560514 TRAV6A0A075B6T7 132 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 FAM25EA8MYX2 175 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 H2AFB2P0C5Z0 115 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 RPL29P47914 159 aaKnown RBP12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 CAV2P51636 162 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 IL15RAQ13261 267 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 ATP6V1FQ16864 119 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 NEGR1Q7Z3B1 354 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 NRARPQ7Z6K4 114 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 SAT2Q96F10 170 aaPredicted RBP12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 PFDN5Q99471 154 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 NUDT15Q9NV35 164 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 UQCC1Q9NVA1 299 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 WDR83OSQ9Y284 106 aa12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 LSM5Q9Y4Y9 91 aaKnown RBP12.06□□□□□ -0.48
TSPAN3-208ENST00000560514 CCSO14618 274 aa12.05□□□□□ -0.48
TSPAN3-208ENST00000560514 IGHV3-53P01767 116 aa12.05□□□□□ -0.48
TSPAN3-208ENST00000560514 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
TSPAN3-208ENST00000560514 IGLC2P0DOY2 106 aa12.05□□□□□ -0.48
TSPAN3-208ENST00000560514 OPCMLQ14982 345 aa12.05□□□□□ -0.48
TSPAN3-208ENST00000560514 UBR4Q5T4S7 5183 aa12.05□□□□□ -0.48
TSPAN3-208ENST00000560514 FAM240BA0A1B0GVZ2 78 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 FAM24AA6NFZ4 105 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 ZNF253O75346 499 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 CST7O76096 145 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 SULT1A1P50225 295 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 HBG1P69891 147 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 HBG2P69892 147 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 MZT2BQ6NZ67 158 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 C10orf126Q8N4M7 172 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 ODF3Q96PU9 254 aa12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 LYRM2Q9NU23 88 aaPredicted RBP12.04□□□□□ -0.48
TSPAN3-208ENST00000560514 MPDU1O75352 247 aa12.03□□□□□ -0.48
TSPAN3-208ENST00000560514 CT45A10P0DMU9 189 aa12.03□□□□□ -0.48
TSPAN3-208ENST00000560514 STX12Q86Y82 276 aa12.03□□□□□ -0.48
TSPAN3-208ENST00000560514 TMEM252Q8N6L7 170 aa12.03□□□□□ -0.48
TSPAN3-208ENST00000560514 SEC22CQ9BRL7 303 aa12.03□□□□□ -0.48
TSPAN3-208ENST00000560514 HHLA3Q9XRX5 114 aa12.03□□□□□ -0.48
TSPAN3-208ENST00000560514 C7orf71A4D174 169 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 H3BQ15 152 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 PRAF2O60831 178 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 SLC25A5P05141 298 aaKnown RBP12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 CRYGDP07320 174 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 SRIP30626 198 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 CRYBA4P53673 196 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 MORN5Q5VZ52 161 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 MIC13Q5XKP0 118 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 WFDC10BQ8IUB3 73 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 EIF4E3Q8N5X7 224 aaKnown RBP12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 C11orf72Q8NBR9 251 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 PCNPQ8WW12 178 aaKnown RBP12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 S100ZQ8WXG8 99 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 MRPL53Q96EL3 112 aaKnown RBP12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 C8orf49Q96NF6 230 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 SLC39A9Q9NUM3 307 aa12.02□□□□□ -0.49
TSPAN3-208ENST00000560514 H3BTX0 84 aa12.01□□□□□ -0.49
TSPAN3-208ENST00000560514 SPINK4O60575 86 aa12.01□□□□□ -0.49
TSPAN3-208ENST00000560514 TMEM14CQ9P0S9 112 aa12.01□□□□□ -0.49
TSPAN3-208ENST00000560514 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
TSPAN3-208ENST00000560514 BOLA1Q9Y3E2 137 aa12.01□□□□□ -0.49
TSPAN3-208ENST00000560514 KLF12Q9Y4X4 402 aa12.01□□□□□ -0.49
TSPAN3-208ENST00000560514 SLC17A3O00476 420 aa12□□□□□ -0.49
TSPAN3-208ENST00000560514 TCL1AP56279 114 aa12□□□□□ -0.49
TSPAN3-208ENST00000560514 RAB32Q13637 225 aa12□□□□□ -0.49
TSPAN3-208ENST00000560514 ANXA2RQ3ZCQ2 193 aa12□□□□□ -0.49
TSPAN3-208ENST00000560514 LINC00528Q8N1L1 170 aa12□□□□□ -0.49
TSPAN3-208ENST00000560514 PRELID1Q9Y255 219 aa12□□□□□ -0.49
TSPAN3-208ENST00000560514 TRAV5A0A0B4J249 113 aa11.99□□□□□ -0.49
TSPAN3-208ENST00000560514 TRGV4A0A0C4DH28 118 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms