RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 PRELID1Q9Y255 219 aa12.93□□□□□ -0.34
CHRNA3-206ENST00000559658 CD33P20138 364 aa12.93□□□□□ -0.34
CHRNA3-206ENST00000559658 PNRC1Q12796 327 aaPredicted RBP12.93□□□□□ -0.34
CHRNA3-206ENST00000559658 PRR27Q6MZM9 219 aa12.93□□□□□ -0.34
CHRNA3-206ENST00000559658 RNASE7Q9H1E1 156 aaKnown RBP12.93□□□□□ -0.34
CHRNA3-206ENST00000559658 ZNF256Q9Y2P7 627 aaPredicted RBP12.93□□□□□ -0.34
CHRNA3-206ENST00000559658 PKD1L1Q8TDX9 2849 aa12.92□□□□□ -0.34
CHRNA3-206ENST00000559658 IGLV1-51P01701 117 aa12.92□□□□□ -0.34
CHRNA3-206ENST00000559658 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
CHRNA3-206ENST00000559658 K7EQM0 130 aa12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 HIST1H1AQ02539 215 aaPredicted RBP12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 RHEBQ15382 184 aa12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 C3orf56Q8N813 242 aa12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 ID1P41134 155 aa12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 ARL6IP6Q8N6S5 226 aa12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 OR8A1Q8NGG7 326 aa12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 LY96Q9Y6Y9 160 aa12.91□□□□□ -0.34
CHRNA3-206ENST00000559658 TRBV6-1A0A0K0K1D8 114 aa12.9□□□□□ -0.34
CHRNA3-206ENST00000559658 GCGP01275 180 aa12.9□□□□□ -0.34
CHRNA3-206ENST00000559658 C12orf54Q6X4T0 127 aa12.9□□□□□ -0.34
CHRNA3-206ENST00000559658 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
CHRNA3-206ENST00000559658 PRR25Q96S07 402 aa12.9□□□□□ -0.34
CHRNA3-206ENST00000559658 SERTM2A0A1B0GWG4 89 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 RBAKDNA6NC62 111 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 DEFB131AP59861 70 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 PAFAH1B2P68402 229 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 PRR9Q5T870 116 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 Q6ZQT7 251 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 TMEM183AQ8IXX5 376 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 SFRP2Q96HF1 295 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 MAP6D1Q9H9H5 199 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 NPIPB6E9PJ23 425 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 CT45A10P0DMU9 189 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 CRIP1P50238 77 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 ZNF80P51504 273 aaPredicted RBP12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 KIR3DS1Q14943 382 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 ODF3L2Q3SX64 289 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 C9orf47Q6ZRZ4 202 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 APRG1Q8IVJ8 170 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 CLEC5AQ9NY25 188 aa12.89□□□□□ -0.35
CHRNA3-206ENST00000559658 ANK2Q01484 3957 aa12.88□□□□□ -0.35
CHRNA3-206ENST00000559658 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
CHRNA3-206ENST00000559658 S100A9P06702 114 aaKnown RBP12.88□□□□□ -0.35
CHRNA3-206ENST00000559658 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
CHRNA3-206ENST00000559658 J3KRW8 73 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 CA1P00915 261 aaPredicted RBP12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 IGKV3-20P01619 116 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 TMEM78Q5T7P6 136 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 WFDC10AQ9H1F0 79 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 TRAV25A0A0B4J276 109 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 A0A0J9YX75 114 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 ZNF138P52744 262 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 ERVFC1-1P60608 527 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 SAMD13Q5VXD3 122 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 MDFIQ99750 246 aa12.87□□□□□ -0.35
CHRNA3-206ENST00000559658 CMYA5Q8N3K9 4069 aa12.86□□□□□ -0.35
CHRNA3-206ENST00000559658 TRAV2A0A0B4J234 112 aa12.86□□□□□ -0.35
CHRNA3-206ENST00000559658 OR4C46A6NHA9 309 aa12.86□□□□□ -0.35
CHRNA3-206ENST00000559658 B4DEV8 164 aa12.86□□□□□ -0.35
CHRNA3-206ENST00000559658 CD7P09564 240 aa12.86□□□□□ -0.35
CHRNA3-206ENST00000559658 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
CHRNA3-206ENST00000559658 ZFP30Q9Y2G7 519 aa12.86□□□□□ -0.35
CHRNA3-206ENST00000559658 A0A087WWC5 75 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 IGLL1P15814 213 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 SHISA2Q6UWI4 295 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 SAV1Q9H4B6 383 aaPredicted RBP12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 URGCP-MRPS24S4R325 110 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 V9GYV3 84 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 C19orf71A6NCJ1 209 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 LURAP1LQ8IV03 231 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 OR10G8Q8NGN5 311 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 SMIM12Q96EX1 92 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
CHRNA3-206ENST00000559658 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
CHRNA3-206ENST00000559658 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
CHRNA3-206ENST00000559658 MT-ND4LP03901 98 aa12.84□□□□□ -0.35
CHRNA3-206ENST00000559658 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
CHRNA3-206ENST00000559658 RPL19P84098 196 aaKnown RBP12.84□□□□□ -0.35
CHRNA3-206ENST00000559658 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
CHRNA3-206ENST00000559658 OR4B1Q8NGF8 309 aa12.84□□□□□ -0.35
CHRNA3-206ENST00000559658 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
CHRNA3-206ENST00000559658 H7BYZ3 331 aa12.83□□□□□ -0.36
CHRNA3-206ENST00000559658 SH2D1AO60880 128 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 FOXI2Q6ZQN5 318 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 YPEL4Q96NS1 127 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 M0R2Z0 102 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 BEAN1Q3B7T3 259 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 SAPCD1Q5SSQ6 148 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 COX8CQ7Z4L0 72 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 WFDC9Q8NEX5 89 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 LINC00477Q96M19 166 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 OSTCQ9NRP0 149 aa12.82□□□□□ -0.36
CHRNA3-206ENST00000559658 C19orf73Q9NVV2 129 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms