RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 CTXND1A0A1B0GTU2 59 aa13.99□□□□□ -0.17
SHF-205ENST00000559566 FGF8P55075 233 aaPredicted RBP13.99□□□□□ -0.17
SHF-205ENST00000559566 GNG5P63218 68 aa13.99□□□□□ -0.17
SHF-205ENST00000559566 Q8TAT8 98 aa13.99□□□□□ -0.17
SHF-205ENST00000559566 C11orf45Q8TAV5 145 aa13.99□□□□□ -0.17
SHF-205ENST00000559566 CXorf65A6NEN9 183 aa13.98□□□□□ -0.17
SHF-205ENST00000559566 DIRC3C9JPN6 131 aa13.98□□□□□ -0.17
SHF-205ENST00000559566 CXorf1O96002 111 aa13.98□□□□□ -0.17
SHF-205ENST00000559566 AZU1P20160 251 aa13.98□□□□□ -0.17
SHF-205ENST00000559566 PRR9Q5T870 116 aa13.98□□□□□ -0.17
SHF-205ENST00000559566 ZNF767PQ75MW2 155 aa13.98□□□□□ -0.17
SHF-205ENST00000559566 LINC00477Q96M19 166 aa13.98□□□□□ -0.17
SHF-205ENST00000559566 TMEM208Q9BTX3 173 aa13.98□□□□□ -0.17
SHF-205ENST00000559566 LOC102723971A0A1B0GUV8 181 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 SMIM9A6NGZ8 99 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 PFDN1O60925 122 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 HBE1P02100 147 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 SEC11BP0C7V7 166 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 LEPP41159 167 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 EMP1P54849 157 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 Q6ZQT7 251 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 ZFAND2AQ8N6M9 145 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 ZNF492Q9P255 531 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 RPH3ALQ9UNE2 315 aa13.97□□□□□ -0.17
SHF-205ENST00000559566 KLLNB2CW77 178 aa13.96□□□□□ -0.17
SHF-205ENST00000559566 GGTLC3B5MD39 225 aa13.96□□□□□ -0.17
SHF-205ENST00000559566 TSPOP30536 169 aa13.96□□□□□ -0.17
SHF-205ENST00000559566 CSN1S1P47710 185 aa13.96□□□□□ -0.17
SHF-205ENST00000559566 BTN1A1Q13410 526 aa13.96□□□□□ -0.17
SHF-205ENST00000559566 RRN3P1Q2M238 152 aa13.96□□□□□ -0.17
SHF-205ENST00000559566 IQCF2Q8IXL9 164 aa13.96□□□□□ -0.17
SHF-205ENST00000559566 LINC01587Q99440 93 aa13.96□□□□□ -0.17
SHF-205ENST00000559566 SACSQ9NZJ4 4579 aa13.96□□□□□ -0.18
SHF-205ENST00000559566 TRAV12-3A0A0B4J271 114 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 PLAC8L1A1L4L8 177 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 MAP1LC3B2A6NCE7 125 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 CRISP2P16562 243 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 C12orf74Q32Q52 190 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 STOML3Q8TAV4 291 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 PHLDA1Q8WV24 401 aaPredicted RBP13.95□□□□□ -0.18
SHF-205ENST00000559566 TMED6Q8WW62 240 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 MAP1LC3BQ9GZQ8 125 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 YTHDF2Q9Y5A9 579 aaKnown RBP13.95□□□□□ -0.18
SHF-205ENST00000559566 RYR3Q15413 4870 aa13.95□□□□□ -0.18
SHF-205ENST00000559566 RBAKDNA6NC62 111 aa13.94□□□□□ -0.18
SHF-205ENST00000559566 TPT1P13693 172 aaKnown RBP13.94□□□□□ -0.18
SHF-205ENST00000559566 ZNF138P52744 262 aa13.94□□□□□ -0.18
SHF-205ENST00000559566 TMEM78Q5T7P6 136 aa13.94□□□□□ -0.18
SHF-205ENST00000559566 Q6ZTC4 211 aa13.94□□□□□ -0.18
SHF-205ENST00000559566 GOLT1AQ6ZVE7 132 aa13.94□□□□□ -0.18
SHF-205ENST00000559566 C9orf62Q8N4C0 152 aa13.94□□□□□ -0.18
SHF-205ENST00000559566 RXFP4Q8TDU9 374 aa13.94□□□□□ -0.18
SHF-205ENST00000559566 TMEM167BQ9NRX6 74 aa13.94□□□□□ -0.18
SHF-205ENST00000559566 TRAV8-1A0A0A6YYK1 113 aa13.93□□□□□ -0.18
SHF-205ENST00000559566 C7orf71A4D174 169 aa13.93□□□□□ -0.18
SHF-205ENST00000559566 SLC25A5P05141 298 aaKnown RBP13.93□□□□□ -0.18
SHF-205ENST00000559566 CEMP1Q6PRD7 247 aaPredicted RBP13.93□□□□□ -0.18
SHF-205ENST00000559566 CMTM2Q8TAZ6 248 aa13.93□□□□□ -0.18
SHF-205ENST00000559566 FAM213BQ8TBF2 198 aa13.93□□□□□ -0.18
SHF-205ENST00000559566 DKK2Q9UBU2 259 aa13.93□□□□□ -0.18
SHF-205ENST00000559566 RYR2Q92736 4967 aa13.93□□□□□ -0.18
SHF-205ENST00000559566 ZNF324O75467 553 aaPredicted RBP13.92□□□□□ -0.18
SHF-205ENST00000559566 HTN1P15515 57 aa13.92□□□□□ -0.18
SHF-205ENST00000559566 RNASE4P34096 147 aaKnown RBP13.92□□□□□ -0.18
SHF-205ENST00000559566 TAS2R60P59551 318 aa13.92□□□□□ -0.18
SHF-205ENST00000559566 UBE2G2P60604 165 aa13.92□□□□□ -0.18
SHF-205ENST00000559566 SUMO1P63165 101 aaKnown RBP13.92□□□□□ -0.18
SHF-205ENST00000559566 FAM222AQ5U5X8 452 aa13.92□□□□□ -0.18
SHF-205ENST00000559566 TMEM256Q8N2U0 113 aa13.92□□□□□ -0.18
SHF-205ENST00000559566 TVP23CQ96ET8 276 aa13.92□□□□□ -0.18
SHF-205ENST00000559566 SGK494Q96LW2 274 aa13.92□□□□□ -0.18
SHF-205ENST00000559566 C20orf144Q9BQM9 153 aa13.92□□□□□ -0.18
SHF-205ENST00000559566 TMEM189A5PLL7 270 aa13.91□□□□□ -0.18
SHF-205ENST00000559566 H7BYZ3 331 aa13.91□□□□□ -0.18
SHF-205ENST00000559566 EIF5AP63241 154 aaKnown RBP13.91□□□□□ -0.18
SHF-205ENST00000559566 FAM74A1Q5RGS3 127 aa13.91□□□□□ -0.18
SHF-205ENST00000559566 LYSTQ99698 3801 aa13.91□□□□□ -0.18
SHF-205ENST00000559566 UMAD1C9J7I0 102 aa13.9□□□□□ -0.18
SHF-205ENST00000559566 TCRAP04437 139 aa13.9□□□□□ -0.18
SHF-205ENST00000559566 NKX2-5P52952 324 aaPredicted RBP13.9□□□□□ -0.18
SHF-205ENST00000559566 ARL6IP6Q8N6S5 226 aa13.9□□□□□ -0.18
SHF-205ENST00000559566 C5orf17Q8NAS9 161 aa13.9□□□□□ -0.18
SHF-205ENST00000559566 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
SHF-205ENST00000559566 MBD3L1Q8WWY6 194 aa13.9□□□□□ -0.18
SHF-205ENST00000559566 A0A1B0GV50 99 aa13.89□□□□□ -0.19
SHF-205ENST00000559566 A0A1W2PRE2 83 aa13.89□□□□□ -0.19
SHF-205ENST00000559566 NUPR2A6NF83 97 aa13.89□□□□□ -0.19
SHF-205ENST00000559566 FAM74A7A6NL05 159 aa13.89□□□□□ -0.19
SHF-205ENST00000559566 GPX1P07203 203 aa13.89□□□□□ -0.19
SHF-205ENST00000559566 SPART-AS1P0CW21 52 aa13.89□□□□□ -0.19
SHF-205ENST00000559566 ZFP69Q49AA0 526 aa13.89□□□□□ -0.19
SHF-205ENST00000559566 EPDR1Q9UM22 224 aa13.89□□□□□ -0.19
SHF-205ENST00000559566 TRBV7-9A0A0J9YWB2 115 aa13.88□□□□□ -0.19
SHF-205ENST00000559566 IGLV2-11P01706 119 aa13.88□□□□□ -0.19
SHF-205ENST00000559566 NMBP08949 121 aa13.88□□□□□ -0.19
SHF-205ENST00000559566 SFT2D1Q8WV19 159 aa13.88□□□□□ -0.19
SHF-205ENST00000559566 NIPSNAP3BQ9BS92 247 aa13.88□□□□□ -0.19
SHF-205ENST00000559566 ALMS1Q8TCU4 4167 aa13.88□□□□□ -0.19
SHF-205ENST00000559566 DNAH1Q9P2D7 4330 aa13.88□□□□□ -0.19
SHF-205ENST00000559566 SLC51BQ86UW2 128 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms