RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TMPRSS5Q9H3S3 457 aa13.4□□□□□ -0.26
CASC4-209ENST00000559222 A0A0D9SG52 128 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 PGPA6NDG6 321 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 HBE1P02100 147 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 FHITP49789 147 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 FGF8P55075 233 aaPredicted RBP13.39□□□□□ -0.27
CASC4-209ENST00000559222 LGALSLQ3ZCW2 172 aaPredicted RBP13.39□□□□□ -0.27
CASC4-209ENST00000559222 Q6ZQT7 251 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 C9orf47Q6ZRZ4 202 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 Q6ZTC4 211 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 LYPD1Q8N2G4 141 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 SUN5Q8TC36 379 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 PHLDA1Q8WV24 401 aaPredicted RBP13.39□□□□□ -0.27
CASC4-209ENST00000559222 ODF3Q96PU9 254 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 LYSTQ99698 3801 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 ZNF471Q9BX82 626 aaPredicted RBP13.39□□□□□ -0.27
CASC4-209ENST00000559222 OTORQ9NRC9 128 aa13.39□□□□□ -0.27
CASC4-209ENST00000559222 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 PLAC8L1A1L4L8 177 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 SMIM9A6NGZ8 99 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 DIRC3C9JPN6 131 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 LEPP41159 167 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 BTN1A1Q13410 526 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 RRN3P1Q2M238 152 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 C12orf74Q32Q52 190 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 AKR1C8PQ5T2L2 129 aa13.38□□□□□ -0.27
CASC4-209ENST00000559222 YTHDF2Q9Y5A9 579 aaKnown RBP13.38□□□□□ -0.27
CASC4-209ENST00000559222 TRAV12-3A0A0B4J271 114 aa13.37□□□□□ -0.27
CASC4-209ENST00000559222 CTXND1A0A1B0GTU2 59 aa13.37□□□□□ -0.27
CASC4-209ENST00000559222 KANTRA0A1W2PQU2 76 aa13.37□□□□□ -0.27
CASC4-209ENST00000559222 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
CASC4-209ENST00000559222 IQCF2Q8IXL9 164 aa13.37□□□□□ -0.27
CASC4-209ENST00000559222 ZFAND2AQ8N6M9 145 aa13.37□□□□□ -0.27
CASC4-209ENST00000559222 LINC01587Q99440 93 aa13.37□□□□□ -0.27
CASC4-209ENST00000559222 ZNF492Q9P255 531 aa13.37□□□□□ -0.27
CASC4-209ENST00000559222 KLLNB2CW77 178 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 GGTLC3B5MD39 225 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 CXorf1O96002 111 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 C1QBP02746 253 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 HTN1P15515 57 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 TSPOP30536 169 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 FAM222AQ5U5X8 452 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 AKAP14Q86UN6 197 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 LINC00477Q96M19 166 aa13.36□□□□□ -0.27
CASC4-209ENST00000559222 TRAV8-1A0A0A6YYK1 113 aa13.35□□□□□ -0.27
CASC4-209ENST00000559222 NUPR2A6NF83 97 aa13.35□□□□□ -0.27
CASC4-209ENST00000559222 PFDN1O60925 122 aa13.35□□□□□ -0.27
CASC4-209ENST00000559222 CSN1S1P47710 185 aa13.35□□□□□ -0.27
CASC4-209ENST00000559222 TMEM78Q5T7P6 136 aa13.35□□□□□ -0.27
CASC4-209ENST00000559222 GOLT1AQ6ZVE7 132 aa13.35□□□□□ -0.27
CASC4-209ENST00000559222 DKK2Q9UBU2 259 aa13.35□□□□□ -0.27
CASC4-209ENST00000559222 C7orf71A4D174 169 aa13.34□□□□□ -0.27
CASC4-209ENST00000559222 SLC25A5P05141 298 aaKnown RBP13.34□□□□□ -0.27
CASC4-209ENST00000559222 CRISP2P16562 243 aa13.34□□□□□ -0.27
CASC4-209ENST00000559222 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
CASC4-209ENST00000559222 ZNF138P52744 262 aa13.34□□□□□ -0.27
CASC4-209ENST00000559222 TMEM256Q8N2U0 113 aa13.34□□□□□ -0.27
CASC4-209ENST00000559222 TMED6Q8WW62 240 aa13.34□□□□□ -0.27
CASC4-209ENST00000559222 SGK494Q96LW2 274 aa13.34□□□□□ -0.27
CASC4-209ENST00000559222 RYR2Q92736 4967 aa13.33□□□□□ -0.27
CASC4-209ENST00000559222 RBAKDNA6NC62 111 aa13.33□□□□□ -0.28
CASC4-209ENST00000559222 MAP1LC3B2A6NCE7 125 aa13.33□□□□□ -0.28
CASC4-209ENST00000559222 SEC11BP0C7V7 166 aa13.33□□□□□ -0.28
CASC4-209ENST00000559222 TAS2R60P59551 318 aa13.33□□□□□ -0.28
CASC4-209ENST00000559222 UBE2G2P60604 165 aa13.33□□□□□ -0.28
CASC4-209ENST00000559222 CMTM2Q8TAZ6 248 aa13.33□□□□□ -0.28
CASC4-209ENST00000559222 MAP1LC3BQ9GZQ8 125 aa13.33□□□□□ -0.28
CASC4-209ENST00000559222 TMEM189A5PLL7 270 aa13.32□□□□□ -0.28
CASC4-209ENST00000559222 H7BYZ3 331 aa13.32□□□□□ -0.28
CASC4-209ENST00000559222 ZNF324O75467 553 aaPredicted RBP13.32□□□□□ -0.28
CASC4-209ENST00000559222 RNASE8Q8TDE3 154 aaKnown RBP13.32□□□□□ -0.28
CASC4-209ENST00000559222 RXFP4Q8TDU9 374 aa13.32□□□□□ -0.28
CASC4-209ENST00000559222 TVP23CQ96ET8 276 aa13.32□□□□□ -0.28
CASC4-209ENST00000559222 C20orf144Q9BQM9 153 aa13.32□□□□□ -0.28
CASC4-209ENST00000559222 TMEM167BQ9NRX6 74 aa13.32□□□□□ -0.28
CASC4-209ENST00000559222 LCE6AA0A183 80 aa13.31□□□□□ -0.28
CASC4-209ENST00000559222 A0A1B0GV50 99 aa13.31□□□□□ -0.28
CASC4-209ENST00000559222 SPART-AS1P0CW21 52 aa13.31□□□□□ -0.28
CASC4-209ENST00000559222 SUMO1P63165 101 aaKnown RBP13.31□□□□□ -0.28
CASC4-209ENST00000559222 C9orf62Q8N4C0 152 aa13.31□□□□□ -0.28
CASC4-209ENST00000559222 STOML3Q8TAV4 291 aa13.31□□□□□ -0.28
CASC4-209ENST00000559222 FAM213BQ8TBF2 198 aa13.31□□□□□ -0.28
CASC4-209ENST00000559222 HYDINQ4G0P3 5121 aa13.3□□□□□ -0.28
CASC4-209ENST00000559222 TCRAP04437 139 aa13.3□□□□□ -0.28
CASC4-209ENST00000559222 GPX1P07203 203 aa13.3□□□□□ -0.28
CASC4-209ENST00000559222 TPT1P13693 172 aaKnown RBP13.3□□□□□ -0.28
CASC4-209ENST00000559222 FAM74A1Q5RGS3 127 aa13.3□□□□□ -0.28
CASC4-209ENST00000559222 C5orf17Q8NAS9 161 aa13.3□□□□□ -0.28
CASC4-209ENST00000559222 NIPSNAP3BQ9BS92 247 aa13.3□□□□□ -0.28
CASC4-209ENST00000559222 F6UZH7 168 aa13.29□□□□□ -0.28
CASC4-209ENST00000559222 C16orf74Q96GX8 76 aa13.29□□□□□ -0.28
CASC4-209ENST00000559222 TP53TG3Q9ULZ0 132 aa13.29□□□□□ -0.28
CASC4-209ENST00000559222 TRAV10A0A0B4J240 114 aa13.28□□□□□ -0.28
CASC4-209ENST00000559222 FAM74A7A6NL05 159 aa13.28□□□□□ -0.28
CASC4-209ENST00000559222 IGLV2-11P01706 119 aa13.28□□□□□ -0.28
CASC4-209ENST00000559222 NKX2-5P52952 324 aaPredicted RBP13.28□□□□□ -0.28
CASC4-209ENST00000559222 TMEM263Q8WUH6 116 aaKnown RBP13.28□□□□□ -0.28
CASC4-209ENST00000559222 EPDR1Q9UM22 224 aa13.28□□□□□ -0.28
CASC4-209ENST00000559222 EPPK1P58107 5090 aaKnown RBP13.28□□□□□ -0.28
CASC4-209ENST00000559222 BIRC6Q9NR09 4857 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms