RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 MED23Q9ULK4 1368 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 DSPPQ9NZW4 1301 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 LOC110117498A0A087WWA1 95 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 C3orf85A0A1B0GTC6 90 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 UQCRQO14949 82 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 INE1O15225 51 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 HBDP02042 147 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 MT-ND4LP03901 98 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 ETV6P41212 452 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 CKS1BP61024 79 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 BLCAPP62952 87 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 S100A12P80511 92 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 MIR22HGQ0VDD5 57 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 MORN2Q502X0 79 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 HSD17B12Q53GQ0 312 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 GDF5OSQ5U4N7 250 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 TMEM244Q5VVB8 128 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 KRTAP26-1Q6PEX3 210 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 HAGHLQ6PII5 290 aaPredicted RBP0.74□□□□□ -2.29
VPS13C-207ENST00000558919 GLIPR1L1Q6UWM5 242 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 CASC2Q6XLA1 102 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 PSMF1Q92530 271 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 MRPL57Q9BQC6 102 aaKnown RBP0.74□□□□□ -2.29
VPS13C-207ENST00000558919 HSPB8Q9UJY1 196 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 POLEQ07864 2286 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 ARHGEF28Q8N1W1 1705 aaKnown RBP0.74□□□□□ -2.29
VPS13C-207ENST00000558919 ZCCHC11Q5TAX3 1644 aaKnown RBP0.74□□□□□ -2.29
VPS13C-207ENST00000558919 SCN3AQ9NY46 2000 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 MYH10P35580 1976 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 NISCHQ9Y2I1 1504 aa0.74□□□□□ -2.29
VPS13C-207ENST00000558919 ARAP1Q96P48 1450 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 TAF1LQ8IZX4 1826 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 LOC107984156A0A0G2JMH3 177 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 A0A1B0GW64 132 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 M0R2N4 97 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 NUPR1O60356 82 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 SMIM24O75264 130 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 TCRAP04437 139 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 SLC25A5P05141 298 aaKnown RBP0.73□□□□□ -2.29
VPS13C-207ENST00000558919 HIST1H1BP16401 226 aaKnown RBP0.73□□□□□ -2.29
VPS13C-207ENST00000558919 ZNF25P17030 456 aaPredicted RBP0.73□□□□□ -2.29
VPS13C-207ENST00000558919 SARNPP82979 210 aaKnown RBP0.73□□□□□ -2.29
VPS13C-207ENST00000558919 Q5XG85 94 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 FOXI2Q6ZQN5 318 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 ARL17AQ8IVW1 177 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 LINC00269Q8N2A0 174 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 OR4S1Q8NGB4 309 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 LINC00526Q96FQ7 95 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 NABP2Q9BQ15 211 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 TMEM14CQ9P0S9 112 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 COPZ2Q9P299 210 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 ZFP30Q9Y2G7 519 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 DLC1Q96QB1 1528 aa0.73□□□□□ -2.29
VPS13C-207ENST00000558919 TCOF1Q13428 1488 aaKnown RBP0.73□□□□□ -2.29
VPS13C-207ENST00000558919 RFX7Q2KHR2 1363 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 FRMPD1Q5SYB0 1578 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 IGLV3-32A0A0A0MS00 114 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 CCL25O15444 150 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 HMGN1P05114 100 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 SLC25A4P12235 298 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 COX4I1P13073 169 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 CKS2P33552 79 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 DNAJB13P59910 316 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 PCBD1P61457 104 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 NEDD8Q15843 81 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 SMIM21Q3B7S5 101 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 SPRNQ5BIV9 151 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 LINC00322Q6ZN03 302 aaPredicted RBP0.72□□□□□ -2.29
VPS13C-207ENST00000558919 CIB3Q96Q77 187 aaPredicted RBP0.72□□□□□ -2.29
VPS13C-207ENST00000558919 BANF2Q9H503 90 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 TNFSF18Q9UNG2 199 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 MPC1Q9Y5U8 109 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 UBR2Q8IWV8 1755 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 FAM135BQ49AJ0 1406 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 TECTAO75443 2155 aa0.72□□□□□ -2.29
VPS13C-207ENST00000558919 TRPM1Q7Z4N2 1603 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 IGHV1-24A0A0C4DH33 117 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 PNMA8CA0A1B0GUJ8 204 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 IFITM5A6NNB3 132 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 BBIP1A8MTZ0 92 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 J3QR89 54 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 M0R2Z0 102 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 EDF1O60869 148 aaKnown RBP0.71□□□□□ -2.3
VPS13C-207ENST00000558919 KLF7O75840 302 aaPredicted RBP0.71□□□□□ -2.3
VPS13C-207ENST00000558919 SULT1C4O75897 302 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 PPYP01298 95 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 IGHV3-33P01772 117 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 CCL4P13236 92 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 HLA-DRB4P13762 266 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 EVI2AP22794 236 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 KDELR1P24390 212 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 SNRPD3P62318 126 aaKnown RBP0.71□□□□□ -2.3
VPS13C-207ENST00000558919 QRFPP83859 136 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 HIST1H1AQ02539 215 aaPredicted RBP0.71□□□□□ -2.3
VPS13C-207ENST00000558919 ASB16-AS1Q495Z4 193 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 CCDC58Q4VC31 144 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 TMEM91Q6ZNR0 172 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 ZCCHC23Q6ZST2 131 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 FAM19A2Q8N3H0 131 aa0.71□□□□□ -2.3
VPS13C-207ENST00000558919 MMGT1Q8N4V1 131 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms