RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 SPINK4O60575 86 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 SNRPCP09234 159 aaKnown RBP3.6□□□□□ -1.83
LRRC28-208ENST00000558771 CT45A10P0DMU9 189 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 TAS2R19P59542 299 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 AKR1C1Q04828 323 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 SLAQ13239 276 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 SCXQ7RTU7 201 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 TMEM229BQ8NBD8 167 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 ZNF680Q8NEM1 530 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 ST6GAL2Q96JF0 529 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 VCX3BQ9H321 246 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 ZNF331Q9NQX6 463 aaPredicted RBP3.6□□□□□ -1.83
LRRC28-208ENST00000558771 SHPKQ9UHJ6 478 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 HHLA3Q9XRX5 114 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 KLF12Q9Y4X4 402 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 TNXBP22105 4242 aa3.6□□□□□ -1.83
LRRC28-208ENST00000558771 TRAV5A0A0B4J249 113 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 GAGE10A6NGK3 116 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 FAM25AB3EWG3 89 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 FAM25CB3EWG5 89 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 FAM25GB3EWG6 89 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 E5RGE8 158 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 H3BTX0 84 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 RHODO00212 210 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 SLC17A3O00476 420 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 PITX3O75364 302 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 HYPMO75409 117 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 IL5P05113 134 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 OR5G3P0C626 314 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 LINC00869P0C866 280 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 AKR1C4P17516 323 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 CXCL2P19875 107 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 ANXA7P20073 488 aaKnown RBP3.59□□□□□ -1.83
LRRC28-208ENST00000558771 SRIP30626 198 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 LEPP41159 167 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 TCL1AP56279 114 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 PLP1P60201 277 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 ZNF415Q09FC8 603 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 WFDC2Q14508 124 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 SURF2Q15527 256 aaPredicted RBP3.59□□□□□ -1.83
LRRC28-208ENST00000558771 LCN15Q6UWW0 184 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 PATE2Q6UY27 113 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 CYP2G1PQ6ZSU1 146 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 ACOT7LQ6ZUV0 252 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 EIF4E3Q8N5X7 224 aaKnown RBP3.59□□□□□ -1.83
LRRC28-208ENST00000558771 LRTM2Q8N967 370 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 ZBTB8BQ8NAP8 495 aaPredicted RBP3.59□□□□□ -1.83
LRRC28-208ENST00000558771 ODF3Q96PU9 254 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 VGLL1Q99990 258 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 SLC50A1Q9BRV3 221 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 MRPL32Q9BYC8 188 aaKnown RBP3.59□□□□□ -1.83
LRRC28-208ENST00000558771 Q9HAA7 133 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 MRPL16Q9NX20 251 aaKnown RBP3.59□□□□□ -1.83
LRRC28-208ENST00000558771 RCL1Q9Y2P8 373 aaKnown RBP3.59□□□□□ -1.83
LRRC28-208ENST00000558771 KCNIP3Q9Y2W7 256 aa3.59□□□□□ -1.83
LRRC28-208ENST00000558771 TRGV4A0A0C4DH28 118 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 IGHV3-38A0A0C4DH36 116 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 SMCO3A2RU48 225 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 C7orf71A4D174 169 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 IBA57-AS1B1ANH7 110 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 DISC1C4P0D8 188 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 WRBO00258 174 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 SLC25A5P05141 298 aaKnown RBP3.58□□□□□ -1.84
LRRC28-208ENST00000558771 RPP30P78346 268 aaKnown RBP3.58□□□□□ -1.84
LRRC28-208ENST00000558771 CD300CQ08708 224 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 BTN1A1Q13410 526 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 LINC01620Q4KN68 170 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
LRRC28-208ENST00000558771 YIPF6Q96EC8 236 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 ARL6Q9H0F7 186 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 ARV1Q9H2C2 271 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 EXTL2Q9UBQ6 330 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 TP53TG3Q9ULZ0 132 aa3.58□□□□□ -1.84
LRRC28-208ENST00000558771 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.57□□□□□ -1.84
LRRC28-208ENST00000558771 GAGE12JA6NER3 117 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 KLLNB2CW77 178 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 H3BP45 60 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 RS1O15537 224 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 SYNGR2O43760 224 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 MPDU1O75352 247 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 MED6O75586 246 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 SFTA3P0C7M3 94 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 MT1HL1P0DM35 61 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 HNRNPA3P51991 378 aaKnown RBP3.57□□□□□ -1.84
LRRC28-208ENST00000558771 NCS1P62166 190 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 ERCC8Q13216 396 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 LINC01556Q5JQF7 62 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 SPANXN5Q5MJ07 72 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 IBA57Q5T440 356 aaKnown RBP3.57□□□□□ -1.84
LRRC28-208ENST00000558771 Q6ZQT7 251 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 S100A7AQ86SG5 101 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 BPIFA4PQ86YQ2 179 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 OR51S1Q8NGJ8 323 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 CIRBP-AS1Q8TBR5 109 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 BLNKQ8WV28 456 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 PCNPQ8WW12 178 aaKnown RBP3.57□□□□□ -1.84
LRRC28-208ENST00000558771 SAT2Q96F10 170 aaPredicted RBP3.57□□□□□ -1.84
LRRC28-208ENST00000558771 ZNF479Q96JC4 524 aa3.57□□□□□ -1.84
LRRC28-208ENST00000558771 CIB3Q96Q77 187 aaPredicted RBP3.57□□□□□ -1.84
LRRC28-208ENST00000558771 CHAC1Q9BUX1 264 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms