RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 IGLC3P0DOY3 106 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 UQCRFS1P47985 274 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 BATFQ16520 125 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 SPATA45Q537H7 98 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 FBLN7Q53RD9 439 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 FAM104BQ5XKR9 115 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 Q6ZN92 141 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 C9orf47Q6ZRZ4 202 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 FA2HQ7L5A8 372 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 FER1L6-AS1Q8NA97 138 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 RNASE8Q8TDE3 154 aaKnown RBP6.43□□□□□ -1.38
SPG11-209ENST00000558253 CCDC140Q96MF4 163 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 MS4A6AQ9H2W1 248 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 ST20Q9HBF5 79 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 AP5S1Q9NUS5 200 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 PAM16Q9Y3D7 125 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 PIEZO2Q9H5I5 2752 aa6.43□□□□□ -1.38
SPG11-209ENST00000558253 A6NDX4 124 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 SYS1-DBNDD2H3BUS1 97 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 CCL25O15444 150 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 IGHV3-23P01764 117 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 IGHG2P01859 326 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 ARMS2P0C7Q2 107 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 IGLC6P0CF74 106 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 ZNF138P52744 262 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 ATP5J2P56134 94 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 TMEM78Q5T7P6 136 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 LYZL1Q6UWQ5 148 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 CLEC19AQ6UXS0 136 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 C9orf139Q6ZV77 190 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 FAM19A2Q8N3H0 131 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 OR10AG1Q8NH19 301 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 PRSS3P2Q8NHM4 247 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 PIFOQ8TCI5 191 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 VPS25Q9BRG1 176 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 S4R3C0 116 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 DMXL2Q8TDJ6 3036 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 NAV3Q8IVL0 2385 aa6.42□□□□□ -1.38
SPG11-209ENST00000558253 ATMQ13315 3056 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 IGKV2-40A0A087WW87 121 aaPredicted RBP6.41□□□□□ -1.38
SPG11-209ENST00000558253 IGHV1-24A0A0C4DH33 117 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 IGHV4-61A0A0C4DH41 118 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 CLPSL1A2RUU4 121 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 OVOL1O14753 267 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 IGKV2D-40P01614 121 aaPredicted RBP6.41□□□□□ -1.38
SPG11-209ENST00000558253 IGHG4P01861 327 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 TRGV3P03979 118 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 ARL3P36405 182 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 CACNG7P62955 275 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 EBLN2Q6P2I7 272 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 BCL6BQ8N143 479 aaPredicted RBP6.41□□□□□ -1.38
SPG11-209ENST00000558253 DPF1Q92782 380 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 LINC00477Q96M19 166 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 C8orf49Q96NF6 230 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 PMCHL2Q9BQD1 86 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 CSTL1Q9H114 145 aa6.41□□□□□ -1.38
SPG11-209ENST00000558253 LINC01546A6NGU7 62 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 G3V318 75 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 K7EMT4 169 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 ORM1P02763 201 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 SCGB1A1P11684 91 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 TSPOP30536 169 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 C12orf54Q6X4T0 127 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 STPG4Q8N801 248 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 GLMPQ8WWB7 406 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 URB1-AS1Q96HZ7 61 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 PRELID3AQ96N28 172 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 VGLL1Q99990 258 aa6.4□□□□□ -1.38
SPG11-209ENST00000558253 IGHV4-4A0A075B6R2 117 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 TRAV40A0A0B4J280 105 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 PPIFP30405 207 aaKnown RBP6.39□□□□□ -1.39
SPG11-209ENST00000558253 CKS2P33552 79 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 FOXE3Q13461 319 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 TWIST1Q15672 202 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 TDRG1Q3Y452 100 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 LINC01545Q5VT33 79 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 DEFB125Q8N687 156 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 LINC01356Q8N9X3 169 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 TPPP3Q9BW30 176 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 NXT2Q9NPJ8 142 aaKnown RBP6.39□□□□□ -1.39
SPG11-209ENST00000558253 CEP295Q9C0D2 2601 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 ADGRG4Q8IZF6 3080 aa6.39□□□□□ -1.39
SPG11-209ENST00000558253 TRAV8-2A0A0B4J237 113 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 OR4C46A6NHA9 309 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 PRSS47A8MTI9 375 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 MED14OSP0DP75 135 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 VAMP3Q15836 100 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 FAM106AQ4KMX7 169 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 OR10J6PQ8NGY7 276 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 C16orf92Q96LL3 132 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 ZNF747Q9BV97 191 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 AGPAT4-IT1Q9H0P7 198 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 MAP1LC3AQ9H492 121 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 RNF114Q9Y508 228 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 PLXNB1O43157 2135 aa6.38□□□□□ -1.39
SPG11-209ENST00000558253 SPTA1P02549 2419 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms