RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 STHQ8IWL8 128 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 CYB561D1Q8N8Q1 229 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 CLRN3Q8NCR9 226 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 SUN5Q8TC36 379 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 DNAJC4Q9NNZ3 241 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 TMEM167BQ9NRX6 74 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 ARL2-SNX15V9GYD0 113 aa5.51□□□□□ -1.53
SPG11-205ENST00000558080 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 HELTA6NFD8 242 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 F6UZH7 168 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 TMEM250H0YL14 139 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 PDE6DO43924 150 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 PAGE4O60829 102 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 EIF3GO75821 320 aaKnown RBP eCLIP5.5□□□□□ -1.53
SPG11-205ENST00000558080 TOMM40O96008 361 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 PSG1P11464 419 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 GATA2P23769 480 aaPredicted RBP5.5□□□□□ -1.53
SPG11-205ENST00000558080 GCHFRP30047 84 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 PLP1P60201 277 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 NANOS2P60321 138 aaKnown RBP5.5□□□□□ -1.53
SPG11-205ENST00000558080 ZNF90Q03938 601 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 RHEBQ15382 184 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 FAM74A3Q4VXF1 159 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 ACTL10Q5JWF8 245 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 C10orf113Q5VZT2 155 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 SPATA31B1PQ5VZV4 182 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 ATRAIDQ6UW56 229 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 MIR17HGQ75NE6 70 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 S100A7AQ86SG5 101 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 OR51G1Q8NGK1 321 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 DCANP1Q8TF63 244 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 PHLDA1Q8WV24 401 aaPredicted RBP5.5□□□□□ -1.53
SPG11-205ENST00000558080 GLMPQ8WWB7 406 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 NIPSNAP3BQ9BS92 247 aa5.5□□□□□ -1.53
SPG11-205ENST00000558080 SEPSECSQ9HD40 501 aaKnown RBP5.5□□□□□ -1.53
SPG11-205ENST00000558080 KLK5Q9Y337 293 aaPredicted RBP5.5□□□□□ -1.53
SPG11-205ENST00000558080 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
SPG11-205ENST00000558080 C11orf94C9JXX5 98 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 M0R036 132 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 OR7C2O60412 319 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 HYPMO75409 117 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 GIG44P09565 113 aaPredicted RBP5.49□□□□□ -1.53
SPG11-205ENST00000558080 ATF4P18848 351 aaPredicted RBP5.49□□□□□ -1.53
SPG11-205ENST00000558080 CEBPGP53567 150 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 PNRC1Q12796 327 aaPredicted RBP5.49□□□□□ -1.53
SPG11-205ENST00000558080 BTN1A1Q13410 526 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 FHL2Q14192 279 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 PSMG4Q5JS54 123 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 TRPT1Q86TN4 253 aaKnown RBP5.49□□□□□ -1.53
SPG11-205ENST00000558080 C11orf45Q8TAV5 145 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 TMEM37Q8WXS4 190 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 LINC00476Q8WZB0 136 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 TVP23CQ96ET8 276 aa5.49□□□□□ -1.53
SPG11-205ENST00000558080 H3BQ15 152 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 BUB3O43684 328 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 UBE2G2P60604 165 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 LYZP61626 148 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 CST9LP1Q5W188 147 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 MORN3Q6PF18 240 aaPredicted RBP5.48□□□□□ -1.53
SPG11-205ENST00000558080 SIGLEC15Q6ZMC9 328 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 NUDT10Q8NFP7 164 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 OR1B1Q8NGR6 318 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 RNF125Q96EQ8 232 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 ZNF503Q96F45 646 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 NUDT11Q96G61 164 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 UHRF2Q96PU4 802 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 SLC25A2Q9BXI2 301 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 NRN1Q9NPD7 142 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 CLEC5AQ9NY25 188 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 DOK5Q9P104 306 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 HIGD1AQ9Y241 93 aa5.48□□□□□ -1.53
SPG11-205ENST00000558080 IGHV4-28A0A0C4DH34 117 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 A0A1W2PRE2 83 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 C7orf77A4D0Y5 90 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 FAM74A7A6NL05 159 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 ZNF727A8MUV8 499 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 B4DEV8 164 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 RBMY1A1P0DJD3 496 aaKnown RBP5.47□□□□□ -1.53
SPG11-205ENST00000558080 RBMY1CP0DJD4 496 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 ORM2P19652 201 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 S100A7P31151 101 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 ATP5G3P48201 142 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 DEFB1P60022 68 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 SNRPD3P62318 126 aaKnown RBP5.47□□□□□ -1.53
SPG11-205ENST00000558080 UBE2L3P68036 154 aaKnown RBP5.47□□□□□ -1.53
SPG11-205ENST00000558080 RBMY1FQ15415 496 aaKnown RBP5.47□□□□□ -1.53
SPG11-205ENST00000558080 PATE2Q6UY27 113 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 LINC00305Q7Z4B0 112 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 FAM167A-AS1Q96KT0 104 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 SMIM7Q9BQ49 75 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 PAXXQ9BUH6 204 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 OR51M1Q9H341 326 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 C11orf68Q9H3H3 251 aaKnown RBP5.47□□□□□ -1.53
SPG11-205ENST00000558080 RPS10P5Q9NQ39 176 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 SMCO4Q9NRQ5 59 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 C11orf21Q9P2W6 132 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 NAT8Q9UHE5 227 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 RNF24Q9Y225 148 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 PRELID1Q9Y255 219 aa5.47□□□□□ -1.53
SPG11-205ENST00000558080 A0A087WWC5 75 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms