RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 RNF141Q8WVD5 230 aa11.35□□□□□ -0.59
AC027088.1-201ENST00000557966 ATP5SQ99766 215 aa11.35□□□□□ -0.59
AC027088.1-201ENST00000557966 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
AC027088.1-201ENST00000557966 PRELID1Q9Y255 219 aa11.35□□□□□ -0.59
AC027088.1-201ENST00000557966 IGKV2-40A0A087WW87 121 aaPredicted RBP11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 KLLNB2CW77 178 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 SSNA1O43805 119 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 MPC2O95563 127 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 NUDT3O95989 172 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 IGKV2D-40P01614 121 aaPredicted RBP11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 ICAM4Q14773 271 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 CCDC28AQ8IWP9 274 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 FXYD5Q96DB9 178 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 PHYHIPLQ96FC7 376 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 MRPL32Q9BYC8 188 aaKnown RBP11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 OR51M1Q9H341 326 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 HSPB11Q9Y547 144 aa11.34□□□□□ -0.59
AC027088.1-201ENST00000557966 C7orf71A4D174 169 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 SLC25A5P05141 298 aaKnown RBP11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 OR10J4P0C629 311 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 NBEAP1P0C6P0 100 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 CD300CQ08708 224 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 PRR9Q5T870 116 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 ZNF503Q96F45 646 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 PYGO2Q9BRQ0 406 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 KCNIP2Q9NS61 270 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 FUT9Q9Y231 359 aa11.33□□□□□ -0.6
AC027088.1-201ENST00000557966 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 GAGE7O76087 117 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 HOXA5P20719 270 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 C9orf47Q6ZRZ4 202 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 VGLL1Q99990 258 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 ATG101Q9BSB4 218 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 PAXXQ9BUH6 204 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 SMIM3Q9BZL3 60 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 MBD2Q9UBB5 411 aa11.32□□□□□ -0.6
AC027088.1-201ENST00000557966 C17orf112F2Z3M2 114 aa11.31□□□□□ -0.6
AC027088.1-201ENST00000557966 ZNF324O75467 553 aaPredicted RBP11.31□□□□□ -0.6
AC027088.1-201ENST00000557966 EIF3GO75821 320 aaKnown RBP eCLIP11.31□□□□□ -0.6
AC027088.1-201ENST00000557966 CRISP2P16562 243 aa11.31□□□□□ -0.6
AC027088.1-201ENST00000557966 RPL12P30050 165 aaKnown RBP11.31□□□□□ -0.6
AC027088.1-201ENST00000557966 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
AC027088.1-201ENST00000557966 C11orf72Q8NBR9 251 aa11.31□□□□□ -0.6
AC027088.1-201ENST00000557966 ZNRF2Q8NHG8 242 aa11.31□□□□□ -0.6
AC027088.1-201ENST00000557966 PET100P0DJ07 73 aa11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 FAM3BP58499 235 aaPredicted RBP11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 FFAR4Q5NUL3 377 aa11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 Q6ZQT7 251 aa11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 Q6ZTI0 123 aa11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 LINC00467Q9BRT7 94 aa11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 WFDC1Q9HC57 220 aa11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 GSN-AS1Q9NRJ2 163 aa11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 LINC00588Q9Y4M8 146 aa11.3□□□□□ -0.6
AC027088.1-201ENST00000557966 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 OR7C2O60412 319 aa11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 DAZ2Q13117 558 aaKnown RBP11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 OR5I1Q13606 314 aa11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 AKAP14Q86UN6 197 aa11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 Q8TAT8 98 aa11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 TMPRSS5Q9H3S3 457 aa11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 ZNF492Q9P255 531 aa11.29□□□□□ -0.6
AC027088.1-201ENST00000557966 RYR1P21817 5038 aa11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 LRP1BQ9NZR2 4599 aa11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 A0A0J9YY99 117 aa11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 UBE2L3P68036 154 aaKnown RBP11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 ZNF680Q8NEM1 530 aa11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 TP53TG3Q9ULZ0 132 aa11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 ALG5Q9Y673 324 aa11.28□□□□□ -0.6
AC027088.1-201ENST00000557966 IFNA5P01569 189 aa11.27□□□□□ -0.61
AC027088.1-201ENST00000557966 GPX1P07203 203 aa11.27□□□□□ -0.61
AC027088.1-201ENST00000557966 M6PRP20645 277 aa11.27□□□□□ -0.61
AC027088.1-201ENST00000557966 RANP62826 216 aaKnown RBP11.27□□□□□ -0.61
AC027088.1-201ENST00000557966 ANXA2RQ3ZCQ2 193 aa11.27□□□□□ -0.61
AC027088.1-201ENST00000557966 GNPNAT1Q96EK6 184 aaPredicted RBP11.27□□□□□ -0.61
AC027088.1-201ENST00000557966 Q9H3A6 140 aa11.27□□□□□ -0.61
AC027088.1-201ENST00000557966 KLF12Q9Y4X4 402 aa11.27□□□□□ -0.61
AC027088.1-201ENST00000557966 NBDYA0A0U1RRE5 68 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 NMBP08949 121 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 ZNF138P52744 262 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 CCL18P55774 89 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 KHDC3LQ587J8 217 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 C1orf134Q5TEV5 83 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 SCGB1C1Q8TD33 95 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
AC027088.1-201ENST00000557966 SPINK4O60575 86 aa11.25□□□□□ -0.61
AC027088.1-201ENST00000557966 TCL1AP56279 114 aa11.25□□□□□ -0.61
AC027088.1-201ENST00000557966 C18orf15Q96N68 181 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms