RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 OCC1Q8TAD7 63 aa17.77■□□□□ 0.44
SIX4-203ENST00000556952 OR4C46A6NHA9 309 aa17.76■□□□□ 0.43
SIX4-203ENST00000556952 PRNTQ86SH4 94 aa17.76■□□□□ 0.43
SIX4-203ENST00000556952 FAM24BQ8N5W8 94 aa17.76■□□□□ 0.43
SIX4-203ENST00000556952 ZFP30Q9Y2G7 519 aa17.76■□□□□ 0.43
SIX4-203ENST00000556952 IGLV2-8P01709 118 aa17.75■□□□□ 0.43
SIX4-203ENST00000556952 ZNF688P0C7X2 276 aa17.75■□□□□ 0.43
SIX4-203ENST00000556952 VGLL1Q99990 258 aa17.75■□□□□ 0.43
SIX4-203ENST00000556952 INSL3P51460 131 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 PSMG4Q5JS54 123 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 C9orf47Q6ZRZ4 202 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 OR10J6PQ8NGY7 276 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 ISOC2Q96AB3 205 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 MLST8Q9BVC4 326 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 PRB4P10163 310 aaPredicted RBP17.74■□□□□ 0.43
SIX4-203ENST00000556952 TMEM78Q5T7P6 136 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 ATRAIDQ6UW56 229 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 TMEM183AQ8IXX5 376 aa17.74■□□□□ 0.43
SIX4-203ENST00000556952 C7orf77A4D0Y5 90 aa17.73■□□□□ 0.43
SIX4-203ENST00000556952 K7EN84 100 aa17.73■□□□□ 0.43
SIX4-203ENST00000556952 OR8A1Q8NGG7 326 aa17.73■□□□□ 0.43
SIX4-203ENST00000556952 AURKAIP1Q9NWT8 199 aaPredicted RBP17.73■□□□□ 0.43
SIX4-203ENST00000556952 ZNF256Q9Y2P7 627 aaPredicted RBP17.73■□□□□ 0.43
SIX4-203ENST00000556952 NOTCH3Q9UM47 2321 aa17.73■□□□□ 0.43
SIX4-203ENST00000556952 IZUMO1RA6ND01 250 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 NPIPB6E9PJ23 425 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 GCGP01275 180 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 SAPCD1Q5SSQ6 148 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 C9orf66Q5T8R8 295 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 NHLRC2Q8NBF2 726 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 NDFIP1Q9BT67 221 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 MCRIP2Q9BUT9 160 aaKnown RBP17.72■□□□□ 0.43
SIX4-203ENST00000556952 BIN3Q9NQY0 253 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 PPP1R14DQ9NXH3 145 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 NOTCH1P46531 2555 aa17.72■□□□□ 0.43
SIX4-203ENST00000556952 A0A087WWC5 75 aa17.71■□□□□ 0.43
SIX4-203ENST00000556952 MGST1P10620 155 aaKnown RBP17.71■□□□□ 0.43
SIX4-203ENST00000556952 ERCC8Q13216 396 aa17.71■□□□□ 0.43
SIX4-203ENST00000556952 LINC00477Q96M19 166 aa17.71■□□□□ 0.43
SIX4-203ENST00000556952 RPS10P5Q9NQ39 176 aa17.71■□□□□ 0.43
SIX4-203ENST00000556952 CD33P20138 364 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 ZNF138P52744 262 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 PRR25Q96S07 402 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 AGPAT4-IT1Q9H0P7 198 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 MT-ND4LP03901 98 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 COX8CQ7Z4L0 72 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 WFDC9Q8NEX5 89 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 Q8TAT8 98 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 ZNF492Q9P255 531 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 LENEPQ9Y5L5 61 aa17.7■□□□□ 0.42
SIX4-203ENST00000556952 HIST1H1AQ02539 215 aaPredicted RBP17.69■□□□□ 0.42
SIX4-203ENST00000556952 FOXI2Q6ZQN5 318 aa17.69■□□□□ 0.42
SIX4-203ENST00000556952 SFRP2Q96HF1 295 aa17.69■□□□□ 0.42
SIX4-203ENST00000556952 RNF212Q495C1 297 aa17.68■□□□□ 0.42
SIX4-203ENST00000556952 EBLN2Q6P2I7 272 aa17.68■□□□□ 0.42
SIX4-203ENST00000556952 ANAPC16Q96DE5 110 aa17.68■□□□□ 0.42
SIX4-203ENST00000556952 CTDSP1Q9GZU7 261 aa17.68■□□□□ 0.42
SIX4-203ENST00000556952 MAP6D1Q9H9H5 199 aa17.68■□□□□ 0.42
SIX4-203ENST00000556952 A0A0J9YX75 114 aa17.67■□□□□ 0.42
SIX4-203ENST00000556952 F6UB75 175 aa17.67■□□□□ 0.42
SIX4-203ENST00000556952 OR5I1Q13606 314 aa17.67■□□□□ 0.42
SIX4-203ENST00000556952 SAV1Q9H4B6 383 aaPredicted RBP17.67■□□□□ 0.42
SIX4-203ENST00000556952 PPP1R2P9O14990 202 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 ZNF705DP0CH99 300 aaPredicted RBP17.66■□□□□ 0.42
SIX4-203ENST00000556952 ZNF705BP0CI00 300 aaPredicted RBP17.66■□□□□ 0.42
SIX4-203ENST00000556952 CMC4P56277 68 aaPredicted RBP17.66■□□□□ 0.42
SIX4-203ENST00000556952 DEFB131AP59861 70 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 DEFB1P60022 68 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 GPR61Q9BZJ8 451 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 TMEM242Q9NWH2 141 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 TRBV7-9A0A0J9YWB2 115 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 SCO1O75880 301 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 DUSP14O95147 198 aaKnown RBP17.66■□□□□ 0.42
SIX4-203ENST00000556952 CT45A10P0DMU9 189 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 ERVFC1-1P60608 527 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 FAM231DQ6ZW35 169 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 ZC2HC1AQ96GY0 325 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 OSTCQ9NRP0 149 aa17.66■□□□□ 0.42
SIX4-203ENST00000556952 DNAH3Q8TD57 4116 aa17.65■□□□□ 0.42
SIX4-203ENST00000556952 IBA57Q5T440 356 aaKnown RBP17.65■□□□□ 0.42
SIX4-203ENST00000556952 PRR27Q6MZM9 219 aa17.65■□□□□ 0.42
SIX4-203ENST00000556952 C15orf54Q8N8G6 183 aa17.65■□□□□ 0.42
SIX4-203ENST00000556952 C8orf49Q96NF6 230 aa17.65■□□□□ 0.42
SIX4-203ENST00000556952 BEAN1Q3B7T3 259 aa17.64■□□□□ 0.41
SIX4-203ENST00000556952 SMUG1Q53HV7 270 aa17.64■□□□□ 0.41
SIX4-203ENST00000556952 GDF5OSQ5U4N7 250 aa17.64■□□□□ 0.41
SIX4-203ENST00000556952 OR10G8Q8NGN5 311 aa17.64■□□□□ 0.41
SIX4-203ENST00000556952 ODF3Q96PU9 254 aa17.64■□□□□ 0.41
SIX4-203ENST00000556952 ASCL2Q99929 193 aa17.64■□□□□ 0.41
SIX4-203ENST00000556952 FAM110AQ9BQ89 295 aa17.64■□□□□ 0.41
SIX4-203ENST00000556952 MEGF8Q7Z7M0 2845 aa17.63■□□□□ 0.41
SIX4-203ENST00000556952 G3V4G9 280 aa17.63■□□□□ 0.41
SIX4-203ENST00000556952 IGLL1P15814 213 aa17.63■□□□□ 0.41
SIX4-203ENST00000556952 ODF3L2Q3SX64 289 aa17.63■□□□□ 0.41
SIX4-203ENST00000556952 FAM19A4Q96LR4 140 aa17.63■□□□□ 0.41
SIX4-203ENST00000556952 H7BYZ3 331 aa17.62■□□□□ 0.41
SIX4-203ENST00000556952 RNASE7Q9H1E1 156 aaKnown RBP17.62■□□□□ 0.41
SIX4-203ENST00000556952 OR11H12B2RN74 326 aa17.62■□□□□ 0.41
SIX4-203ENST00000556952 HLA-DRB4P13762 266 aa17.62■□□□□ 0.41
SIX4-203ENST00000556952 OXLD1Q5BKU9 147 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms