RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 BTAF1O14981 1849 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 COL11A1P12107 1806 aaPredicted RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 ROBO1Q9Y6N7 1651 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 TRAV27A0A087WT01 109 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 MUC21A0A0G2JKD1 596 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 MUC21A0A140T8X8 626 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 A0A1W2PPM0 123 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 ODAMA1E959 279 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 LRCOL1A6NCL2 159 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 FAM24AA6NFZ4 105 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 OR4C46A6NHA9 309 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 TMEM14DPA8MWL7 114 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 RER1O15258 196 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 HCRTO43612 131 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 IGLV7-43P04211 117 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 IFI6P09912 130 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 HMGA1P17096 107 aaKnown RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 G6PCP35575 357 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 ZNF83P51522 516 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 KLRD1Q13241 179 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 SP6Q3SY56 376 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 LYRM7Q5U5X0 104 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 C1orf140Q5VVS0 124 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 Q6ZS92 163 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 DAZ4Q86SG3 579 aaKnown RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 OR8B3Q8NGG8 313 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 OR10D3Q8NH80 312 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 PFN4Q8NHR9 129 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 OTOSQ8NHW6 89 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 PP6455Q8WZ26 134 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 CHCHD1Q96BP2 118 aaKnown RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 ADAT3Q96EY9 351 aaPredicted RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 OR8B2Q96RD0 313 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 GPX7Q96SL4 187 aaPredicted RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 NMNAT3Q96T66 252 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 LINC01587Q99440 93 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 PRSS27Q9BQR3 290 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 TTTY10Q9BZA0 68 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 ULBP3Q9BZM4 244 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 OR2D2Q9H210 308 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 MAP1LC3AQ9H492 121 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 DAZ1Q9NQZ3 744 aaKnown RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 RPRMQ9NS64 109 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 RBM12B-AS1Q9P1G2 102 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 TAAR3PQ9P1P4 343 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 SS18L2Q9UHA2 77 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 ZNF706Q9Y5V0 76 aaPredicted RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 SOX21Q9Y651 276 aaPredicted RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 R4GMQ9 66 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 TSC2P49815 1807 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 ZNF236Q9UL36 1845 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.54□□□□□ -2
PRPF39-210ENST00000556718 NRXN2Q9P2S2 1712 aa2.54□□□□□ -2
PRPF39-210ENST00000556718 ALPK3Q96L96 1907 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 C3orf85A0A1B0GTC6 90 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 A0A1B0GWA3 101 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 GRIFINA4D1Z8 144 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 IZUMO1RA6ND01 250 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 H3BUT2 72 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 K7ERS5 55 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 SDCBPO00560 298 aaPredicted RBP2.53□□□□□ -2
PRPF39-210ENST00000556718 SSSCA1O60232 199 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 NUPR1O60356 82 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 CST7O76096 145 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 EPPINO95925 133 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 COX8AP10176 69 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 IL9P15248 144 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 HIST1H1TP22492 207 aaPredicted RBP2.53□□□□□ -2
PRPF39-210ENST00000556718 EVI2AP22794 236 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 BLVRBP30043 206 aaPredicted RBP2.53□□□□□ -2
PRPF39-210ENST00000556718 CA7P43166 264 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 DLX6P56179 175 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 TAS2R45P59539 299 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 GNG3P63215 75 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 OR8B8Q15620 311 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 CLEC12BQ2HXU8 276 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 Q56UQ5 140 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 TMEM42Q69YG0 159 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 SLC48A1Q6P1K1 146 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 GLIPR1L1Q6UWM5 242 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 TMEM136Q6ZRR5 245 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 LYZL2Q7Z4W2 148 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 LRRC25Q8N386 305 aaPredicted RBP2.53□□□□□ -2
PRPF39-210ENST00000556718 SMIM20Q8N5G0 67 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 RNF182Q8N6D2 247 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 GATD1Q8NB37 220 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.53□□□□□ -2
PRPF39-210ENST00000556718 OR2M3Q8NG83 312 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 OR10AC1Q8NH08 325 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 ATP6V0E2Q8NHE4 81 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 KLF14Q8TD94 323 aaPredicted RBP2.53□□□□□ -2
PRPF39-210ENST00000556718 TSKUQ8WUA8 353 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 ITLN2Q8WWU7 325 aaPredicted RBP2.53□□□□□ -2
PRPF39-210ENST00000556718 SDF2Q99470 211 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 WFDC6Q9BQY6 131 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 HES4Q9HCC6 221 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 STRCQ7RTU9 1775 aa2.53□□□□□ -2
PRPF39-210ENST00000556718 SCN1AP35498 2009 aa2.52□□□□□ -2.01
PRPF39-210ENST00000556718 NYNRINQ9P2P1 1898 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms