RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 IFITM10A6NMD0 228 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 ZNF705GA8MUZ8 300 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 GPR31O00270 319 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 GOSR2O14653 212 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 ARPC5O15511 151 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 CD3DP04234 171 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 FCER2P06734 321 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 TPT1P13693 172 aaKnown RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 TSPOP30536 169 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 FUSP35637 526 aaKnown RBP eCLIP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 OPRK1P41145 380 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 PSMB3P49720 205 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 PAX9P55771 341 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 LINC00315P59091 139 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 DEFB1P60022 68 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 YPEL3P61236 119 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 PNRC1Q12796 327 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 RNASE10Q5GAN6 216 aaKnown RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 FAM78BQ5VT40 261 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 SVBPQ8N300 66 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 INO80EQ8NBZ0 244 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 OR5AP2Q8NGF4 316 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 OR51S1Q8NGJ8 323 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 OR1S1Q8NH92 325 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 RXFP4Q8TDU9 374 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 DEFB104AQ8WTQ1 72 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 SEC22AQ96IW7 307 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 FXYD6Q9H0Q3 95 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 FNDC4Q9H6D8 234 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 MRPL36Q9P0J6 103 aaKnown RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 MBD2Q9UBB5 411 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 ANAPC10Q9UM13 185 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 MRPS16Q9Y3D3 137 aaKnown RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
ATXN3-239ENST00000556315 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
ATXN3-239ENST00000556315 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 A0A087WTM6 91 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 PIGBOS1A0A0B4J2F0 54 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 A0A0J9YX75 114 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 C9orf170A2RU37 121 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 H3BNG1 76 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 PRM2P04554 102 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 IL4P05112 153 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 IGLC1P0CG04 106 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 RD3LP0DJH9 198 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 RNASE2P10153 161 aaKnown RBP3.29□□□□□ -1.88
ATXN3-239ENST00000556315 S100GP29377 79 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 S100A12P80511 92 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 OR5I1Q13606 314 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 TMEM128Q5BJH2 165 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 SPINK9Q5DT21 86 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 SAMD13Q5VXD3 122 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 PRSS54Q6PEW0 395 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 ALKAL2Q6UX46 152 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 SLC35G3Q8N808 338 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 TERB2Q8NHR7 220 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 COQ8AQ8NI60 647 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 ZNF2Q9BSG1 426 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-239ENST00000556315 TMEM70Q9BUB7 260 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 PDCD10Q9BUL8 212 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 ENY2Q9NPA8 101 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 IFT46Q9NQC8 304 aa3.29□□□□□ -1.88
ATXN3-239ENST00000556315 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
ATXN3-239ENST00000556315 VPS13BQ7Z7G8 4022 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 NACAE9PAV3 2078 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 PLAC8L1A1L4L8 177 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 TMEM218A2RU14 115 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 A8MTW9 85 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 F6UB75 175 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 ISLRO14498 428 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 SOCS3O14543 225 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 SIVA1O15304 175 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 ADAP1O75689 374 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 ATG12O94817 140 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 DUSP14O95147 198 aaKnown RBP3.28□□□□□ -1.88
ATXN3-239ENST00000556315 SNAPINO95295 136 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 SFT2D2O95562 160 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 INSP01308 110 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 IGKV1-39P01597 117 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 IGKV1D-39P04432 117 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 AZU1P20160 251 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 OR10J1P30954 320 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 RND2P52198 227 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 TAS2R46P59540 309 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 BTN1A1Q13410 526 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 C1orf194Q5T5A4 169 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 CST9LP1Q5W188 147 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 ETFRF1Q6IPR1 90 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 AMTNQ6UX39 209 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 BAP18Q8IXM2 172 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 OR13C8Q8NGS7 320 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 OR10J6PQ8NGY7 276 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 PPP1R1CQ8WVI7 109 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 MRGPRFQ96AM1 343 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 AQP10Q96PS8 301 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 LINC01587Q99440 93 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 SEC11CQ9BY50 192 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms