RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 FAM122CQ6P4D5 195 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 TMEM88Q6PEY1 159 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 LCN15Q6UWW0 184 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 BPIFA4PQ86YQ2 179 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 Q8TAT8 98 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 FXYD5Q96DB9 178 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 LINC01587Q99440 93 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 VGLL1Q99990 258 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 NIPSNAP3BQ9BS92 247 aa4.5□□□□□ -1.69
TMEM260-209ENST00000556079 WDR61Q9GZS3 305 aaKnown RBP4.5□□□□□ -1.69
TMEM260-209ENST00000556079 SMLR1H3BR10 107 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 AMBPP02760 352 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 RPL12P30050 165 aaKnown RBP4.49□□□□□ -1.69
TMEM260-209ENST00000556079 DEFA1P59665 94 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 DEFA3P59666 94 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 DAD1P61803 113 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 ICAM4Q14773 271 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 FFAR4Q5NUL3 377 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 PXDC1Q5TGL8 231 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 Q6ZRG5 221 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 OR1L4Q8NGR5 311 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 ATP5SQ99766 215 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 SLC50A1Q9BRV3 221 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 AGPAT4-IT1Q9H0P7 198 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 NOP10Q9NPE3 64 aaKnown RBP4.49□□□□□ -1.69
TMEM260-209ENST00000556079 PPP1R14DQ9NXH3 145 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 TP53TG3Q9ULZ0 132 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 FAT1Q14517 4588 aa4.49□□□□□ -1.69
TMEM260-209ENST00000556079 SMIM9A6NGZ8 99 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 C11orf94C9JXX5 98 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 RLN2P04090 185 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 HIST1H1EP10412 219 aaKnown RBP4.48□□□□□ -1.69
TMEM260-209ENST00000556079 CXCL2P19875 107 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 RNASE4P34096 147 aaKnown RBP4.48□□□□□ -1.69
TMEM260-209ENST00000556079 RAB31Q13636 194 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 ATP6V1FQ16864 119 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 SAMD13Q5VXD3 122 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 SSX7Q7RTT5 188 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 OR10J6PQ8NGY7 276 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 RNASE8Q8TDE3 154 aaKnown RBP4.48□□□□□ -1.69
TMEM260-209ENST00000556079 PFDN5Q99471 154 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 PAXXQ9BUH6 204 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 SLC25A31Q9H0C2 315 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 SH3BGRL3Q9H299 93 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 CDIP1Q9H305 208 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 BATF3Q9NR55 127 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 TMEM14CQ9P0S9 112 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 RPH3ALQ9UNE2 315 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 FUT9Q9Y231 359 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 TIMM9Q9Y5J7 89 aa4.48□□□□□ -1.69
TMEM260-209ENST00000556079 A0A0J9YY99 117 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 GAGE12BA1L429 117 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 TMEM189A5PLL7 270 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 G3V3Q6 166 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 ZNF561-AS1K7EIQ3 104 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 OR7C2O60412 319 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 GAGE7O76087 117 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 GAGE12FP0CL80 117 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 GAGE12GP0CL81 117 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 GAGE12IP0CL82 117 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 HOXA5P20719 270 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 CDKN1BP46527 198 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 GNG5P63218 68 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 UBE2L3P68036 154 aaKnown RBP4.47□□□□□ -1.69
TMEM260-209ENST00000556079 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 Q6ZTI0 123 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 ZFAND2AQ8N6M9 145 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 HSD17B11Q8NBQ5 300 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 FAM19A4Q96LR4 140 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 SGK494Q96LW2 274 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 NDUFAF3Q9BU61 184 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 KRTAP4-5Q9BYR2 181 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 OR51M1Q9H341 326 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 KLF12Q9Y4X4 402 aa4.47□□□□□ -1.69
TMEM260-209ENST00000556079 TRAV8-1A0A0A6YYK1 113 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 A0A1B0GVY2 172 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 C7orf71A4D174 169 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 PRSS47A8MTI9 375 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 F5H768 121 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 RTL8CO15255 209 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 MPDU1O75352 247 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 PTTG1O95997 202 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 IGHV3-53P01767 116 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 NBEAP1P0C6P0 100 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 S100A7P31151 101 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 LEPP41159 167 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 TAS2R60P59551 318 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 RANP62826 216 aaKnown RBP4.46□□□□□ -1.7
TMEM260-209ENST00000556079 CYCSP99999 105 aaKnown RBP4.46□□□□□ -1.7
TMEM260-209ENST00000556079 MUC21Q5SSG8 566 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 POM121L12Q8N7R1 296 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 C11orf72Q8NBR9 251 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 HYLS1Q96M11 299 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 MED28Q9H204 178 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 Q9H3A6 140 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 TMPRSS5Q9H3S3 457 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 GSN-AS1Q9NRJ2 163 aa4.46□□□□□ -1.7
TMEM260-209ENST00000556079 MRPL16Q9NX20 251 aaKnown RBP4.46□□□□□ -1.7
TMEM260-209ENST00000556079 FXYD6-FXYD2A0A087WZ82 144 aa4.45□□□□□ -1.7
TMEM260-209ENST00000556079 RNF222A6NCQ9 220 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms