RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PRAC2D3DTV9 90 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 IGKV2D-40P01614 121 aaPredicted RBP5.61□□□□□ -1.51
TDP1-214ENST00000556063 TCRAP04437 139 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 ZNF705DP0CH99 300 aaPredicted RBP5.61□□□□□ -1.51
TDP1-214ENST00000556063 ZNF705BP0CI00 300 aaPredicted RBP5.61□□□□□ -1.51
TDP1-214ENST00000556063 ZNF138P52744 262 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 GOLT1AQ6ZVE7 132 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 SBSPONQ8IVN8 264 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 CYB561D1Q8N8Q1 229 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 RCHY1Q96PM5 261 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 ASCL2Q99929 193 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 ATG101Q9BSB4 218 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 NDFIP1Q9BT67 221 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 TP53TG1Q9Y2A0 90 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 LENEPQ9Y5L5 61 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 DNHD1Q96M86 4753 aa5.61□□□□□ -1.51
TDP1-214ENST00000556063 C11orf94C9JXX5 98 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 PEX7O00628 323 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 SPRY2O43597 315 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 INSP01308 110 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 S100A9P06702 114 aaKnown RBP5.6□□□□□ -1.51
TDP1-214ENST00000556063 NMBP08949 121 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 BCL2P10415 239 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 CDKN1BP46527 198 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 GNG5P63218 68 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 SPINK13Q1W4C9 94 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 AMTNQ6UX39 209 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 ZNF767PQ75MW2 155 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 IGF2BP2-AS1Q96M15 143 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 AGPAT4-IT1Q9H0P7 198 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 ZNF492Q9P255 531 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 XCL2Q9UBD3 114 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 VAX2Q9UIW0 290 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 GOLT1BQ9Y3E0 138 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 FBN3Q75N90 2809 aa5.6□□□□□ -1.51
TDP1-214ENST00000556063 PDE6DO43924 150 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 GPX1P07203 203 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 CT45A10P0DMU9 189 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 AKR1C3P42330 323 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 ATP5G3P48201 142 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 FXYD7P58549 80 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 UBE2G1P62253 170 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 CCL20P78556 96 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 FLI1Q01543 452 aaPredicted RBP5.59□□□□□ -1.51
TDP1-214ENST00000556063 MEF2BQ02080 365 aaPredicted RBP5.59□□□□□ -1.51
TDP1-214ENST00000556063 ERCC8Q13216 396 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 DEFB135Q30KP9 77 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 SAPCD1Q5SSQ6 148 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 CCDC28AQ8IWP9 274 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 TMEM256Q8N2U0 113 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 TMEM75Q8N9X5 138 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 LYPD6BQ8NI32 183 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 RNF183Q96D59 192 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 VGLL1Q99990 258 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 C20orf144Q9BQM9 153 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 TM2D3Q9BRN9 247 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 TMEM208Q9BTX3 173 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 SLC35B3Q9H1N7 401 aa5.59□□□□□ -1.51
TDP1-214ENST00000556063 RBFOX3A6NFN3 312 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 M0R2Z0 102 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 PRB4P10163 310 aaPredicted RBP5.58□□□□□ -1.52
TDP1-214ENST00000556063 CRISP2P16562 243 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 PRNTQ86SH4 94 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 FMC1Q96HJ9 113 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 RARRES2Q99969 163 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 NIPSNAP3BQ9BS92 247 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 EIF5A2Q9GZV4 153 aaKnown RBP5.58□□□□□ -1.52
TDP1-214ENST00000556063 TREM1Q9NP99 234 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 PSG8Q9UQ74 426 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 ZFP30Q9Y2G7 519 aa5.58□□□□□ -1.52
TDP1-214ENST00000556063 TRAV8-1A0A0A6YYK1 113 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 LOC102723971A0A1B0GUV8 181 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 C7orf71A4D174 169 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 SMIM9A6NGZ8 99 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 KLLNB2CW77 178 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 H7BYZ3 331 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 NDUFS6O75380 124 aaKnown RBP5.57□□□□□ -1.52
TDP1-214ENST00000556063 GIG44P09565 113 aaPredicted RBP5.57□□□□□ -1.52
TDP1-214ENST00000556063 TMEM183BQ1AE95 376 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 ZNF506Q5JVG8 444 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 CSNK1G2-AS1Q8NCQ2 148 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 OR11H2Q8NH07 326 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 Q8TAT8 98 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 C11orf52Q96A22 123 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 FAM19A4Q96LR4 140 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 LINC01587Q99440 93 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 OVOL2Q9BRP0 275 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 MED9Q9NWA0 146 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 KLF12Q9Y4X4 402 aa5.57□□□□□ -1.52
TDP1-214ENST00000556063 TRAV12-2A0A075B6T6 113 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 IGHV3OR16-12A0A075B7B8 117 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 TRAV34A0A0B4J273 112 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 TRBV6-1A0A0K0K1D8 114 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 SCO2A0A1W2PP80 73 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 TMEM250H0YL14 139 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 J3KRW8 73 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 CRXO43186 299 aaPredicted RBP5.56□□□□□ -1.52
TDP1-214ENST00000556063 MIFP14174 115 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 RNASE4P34096 147 aaKnown RBP5.56□□□□□ -1.52
TDP1-214ENST00000556063 TAS2R60P59551 318 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms