RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 PFDN5Q99471 154 aa13.23□□□□□ -0.29
FOXN3-211ENST00000555855 FLVCR2Q9UPI3 526 aa13.23□□□□□ -0.29
FOXN3-211ENST00000555855 PRELID1Q9Y255 219 aa13.23□□□□□ -0.29
FOXN3-211ENST00000555855 LY96Q9Y6Y9 160 aa13.23□□□□□ -0.29
FOXN3-211ENST00000555855 C7orf66A4D0T2 115 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 KLLNB2CW77 178 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 FAM229AH3BQW9 127 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 RGS13O14921 159 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 SMR3BP02814 79 aaPredicted RBP13.22□□□□□ -0.29
FOXN3-211ENST00000555855 GCSHP23434 173 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 CD300CQ08708 224 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 MIC13Q5XKP0 118 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 NEGR1Q7Z3B1 354 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 RCL1Q9Y2P8 373 aaKnown RBP13.22□□□□□ -0.29
FOXN3-211ENST00000555855 TIMM9Q9Y5J7 89 aa13.22□□□□□ -0.29
FOXN3-211ENST00000555855 K7EP13 123 aa13.21□□□□□ -0.29
FOXN3-211ENST00000555855 M0R3E3 92 aa13.21□□□□□ -0.29
FOXN3-211ENST00000555855 PRAF2O60831 178 aa13.21□□□□□ -0.29
FOXN3-211ENST00000555855 DNAH10OSP0CZ25 163 aa13.21□□□□□ -0.29
FOXN3-211ENST00000555855 BCAP31P51572 246 aa13.21□□□□□ -0.29
FOXN3-211ENST00000555855 CRYBA4P53673 196 aa13.21□□□□□ -0.29
FOXN3-211ENST00000555855 BTN1A1Q13410 526 aa13.21□□□□□ -0.29
FOXN3-211ENST00000555855 IBA57Q5T440 356 aaKnown RBP13.21□□□□□ -0.29
FOXN3-211ENST00000555855 C20orf85Q9H1P6 137 aa13.21□□□□□ -0.29
FOXN3-211ENST00000555855 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
FOXN3-211ENST00000555855 MBPP02686 304 aaPredicted RBP13.2□□□□□ -0.3
FOXN3-211ENST00000555855 EVI2AP22794 236 aa13.2□□□□□ -0.3
FOXN3-211ENST00000555855 C8orf49Q96NF6 230 aa13.2□□□□□ -0.3
FOXN3-211ENST00000555855 ARPC5LQ9BPX5 153 aa13.2□□□□□ -0.3
FOXN3-211ENST00000555855 MRPL16Q9NX20 251 aaKnown RBP13.2□□□□□ -0.3
FOXN3-211ENST00000555855 MSRB1Q9NZV6 116 aa13.2□□□□□ -0.3
FOXN3-211ENST00000555855 NMBP08949 121 aa13.19□□□□□ -0.3
FOXN3-211ENST00000555855 ZNF846Q147U1 533 aa13.19□□□□□ -0.3
FOXN3-211ENST00000555855 FAM19A4Q96LR4 140 aa13.19□□□□□ -0.3
FOXN3-211ENST00000555855 MRPL32Q9BYC8 188 aaKnown RBP13.19□□□□□ -0.3
FOXN3-211ENST00000555855 AAMDCQ9H7C9 122 aa13.19□□□□□ -0.3
FOXN3-211ENST00000555855 MDFICQ9P1T7 246 aa13.19□□□□□ -0.3
FOXN3-211ENST00000555855 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
FOXN3-211ENST00000555855 TRGV4A0A0C4DH28 118 aa13.18□□□□□ -0.3
FOXN3-211ENST00000555855 HIST1H1EP10412 219 aaKnown RBP13.18□□□□□ -0.3
FOXN3-211ENST00000555855 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
FOXN3-211ENST00000555855 FHL2Q14192 279 aa13.18□□□□□ -0.3
FOXN3-211ENST00000555855 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
FOXN3-211ENST00000555855 TRIQKQ629K1 86 aa13.18□□□□□ -0.3
FOXN3-211ENST00000555855 VGLL1Q99990 258 aa13.18□□□□□ -0.3
FOXN3-211ENST00000555855 UQCC1Q9NVA1 299 aa13.18□□□□□ -0.3
FOXN3-211ENST00000555855 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
FOXN3-211ENST00000555855 FLG2Q5D862 2391 aaPredicted RBP13.17□□□□□ -0.3
FOXN3-211ENST00000555855 CENPXA8MT69 81 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 E5RGE8 158 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 CRISP2P16562 243 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 SRIP30626 198 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 CAV2P51636 162 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 PDE6HQ13956 83 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 C9orf47Q6ZRZ4 202 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 MITD1Q8WV92 249 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 TP53TG3Q9ULZ0 132 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 WDR83OSQ9Y284 106 aa13.17□□□□□ -0.3
FOXN3-211ENST00000555855 LSM5Q9Y4Y9 91 aaKnown RBP13.17□□□□□ -0.3
FOXN3-211ENST00000555855 CST7O76096 145 aa13.16□□□□□ -0.3
FOXN3-211ENST00000555855 CNPY1Q3B7I2 92 aa13.16□□□□□ -0.3
FOXN3-211ENST00000555855 BLNKQ8WV28 456 aa13.16□□□□□ -0.3
FOXN3-211ENST00000555855 PCNPQ8WW12 178 aaKnown RBP13.16□□□□□ -0.3
FOXN3-211ENST00000555855 SRRQ9GZT4 340 aa13.16□□□□□ -0.3
FOXN3-211ENST00000555855 NDUFB4O95168 129 aa13.15□□□□□ -0.3
FOXN3-211ENST00000555855 BAXQ07812 192 aa13.15□□□□□ -0.3
FOXN3-211ENST00000555855 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
FOXN3-211ENST00000555855 EXOC3-AS1Q8N2X6 119 aa13.15□□□□□ -0.3
FOXN3-211ENST00000555855 VPS13BQ7Z7G8 4022 aa13.15□□□□□ -0.3
FOXN3-211ENST00000555855 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
FOXN3-211ENST00000555855 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
FOXN3-211ENST00000555855 FAM25EA8MYX2 175 aa13.14□□□□□ -0.31
FOXN3-211ENST00000555855 PVALBP20472 110 aaPredicted RBP13.14□□□□□ -0.31
FOXN3-211ENST00000555855 S100A11P31949 105 aa13.14□□□□□ -0.31
FOXN3-211ENST00000555855 C10orf126Q8N4M7 172 aa13.14□□□□□ -0.31
FOXN3-211ENST00000555855 ZNF492Q9P255 531 aa13.14□□□□□ -0.31
FOXN3-211ENST00000555855 J3QL48 77 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 K7EQD1 137 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 PSCAO43653 123 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 ORM1P02763 201 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 PYYP10082 97 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 BAK1Q16611 211 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 Q6ZSN1 163 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 WFDC10BQ8IUB3 73 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 IQCF2Q8IXL9 164 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 ZFAND2AQ8N6M9 145 aa13.13□□□□□ -0.31
FOXN3-211ENST00000555855 GPN1Q9HCN4 374 aaPredicted RBP13.13□□□□□ -0.31
FOXN3-211ENST00000555855 IGKV2-40A0A087WW87 121 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-211ENST00000555855 IGLV5-52A0A0A0MRZ9 124 aa13.12□□□□□ -0.31
FOXN3-211ENST00000555855 CCSO14618 274 aa13.12□□□□□ -0.31
FOXN3-211ENST00000555855 IGKV2D-40P01614 121 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-211ENST00000555855 CRYGDP07320 174 aa13.12□□□□□ -0.31
FOXN3-211ENST00000555855 GYPEP15421 78 aa13.12□□□□□ -0.31
FOXN3-211ENST00000555855 FAM122CQ6P4D5 195 aa13.12□□□□□ -0.31
FOXN3-211ENST00000555855 CHAC2Q8WUX2 184 aa13.12□□□□□ -0.31
FOXN3-211ENST00000555855 TXNDC17Q9BRA2 123 aa13.12□□□□□ -0.31
FOXN3-211ENST00000555855 UBE2L5PA0A1B0GUS4 154 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms