RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZNF767PQ75MW2 155 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 CCDC28AQ8IWP9 274 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 RXFP4Q8TDU9 374 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 ZNF503Q96F45 646 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 HYLS1Q96M11 299 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 ACTR3CQ9C0K3 210 aaPredicted RBP8.69□□□□□ -1.02
SRP54-206ENST00000555317 OTORQ9NRC9 128 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 IGLL5B9A064 214 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 G3V3Q6 166 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 SLC25A5P05141 298 aaKnown RBP8.68□□□□□ -1.02
SRP54-206ENST00000555317 C12orf74Q32Q52 190 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 AKR1C8PQ5T2L2 129 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 C9orf47Q6ZRZ4 202 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 IQCF2Q8IXL9 164 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 RAB24Q969Q5 203 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 C16orf74Q96GX8 76 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 ARPC5LQ9BPX5 153 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 DKK2Q9UBU2 259 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 RPH3ALQ9UNE2 315 aa8.68□□□□□ -1.02
SRP54-206ENST00000555317 DEFB131BA0A096LNP1 70 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 TRAV12-3A0A0B4J271 114 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 CXorf1O96002 111 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 GPX1P07203 203 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 TCTAP57738 103 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 DAD1P61803 113 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 ZNF345Q14585 488 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 VGLL1Q99990 258 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 AGPAT4-IT1Q9H0P7 198 aa8.67□□□□□ -1.02
SRP54-206ENST00000555317 ALMS1Q8TCU4 4167 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 A0A0D9SG52 128 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 KANTRA0A1W2PQU2 76 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 C7orf71A4D174 169 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 PGPA6NDG6 321 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 LYRM9A8MSI8 78 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 HMSDA8MTL9 139 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 PFDN1O60925 122 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 LY6G6CO95867 125 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 STAG3L2P0CL84 134 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 STAG3L3P0CL85 134 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 GCHFRP30047 84 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 RNASE4P34096 147 aaKnown RBP8.66□□□□□ -1.02
SRP54-206ENST00000555317 ZNF138P52744 262 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 ZNF493Q6ZR52 646 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 TMEM263Q8WUH6 116 aaKnown RBP8.66□□□□□ -1.02
SRP54-206ENST00000555317 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
SRP54-206ENST00000555317 PLECQ15149 4684 aaKnown RBP8.65□□□□□ -1.02
SRP54-206ENST00000555317 CTXND1A0A1B0GTU2 59 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 DIRC3C9JPN6 131 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 PRM2P04554 102 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 NMBP08949 121 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 HTN3P15516 51 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 KCNRGQ8N5I3 272 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 Q8TAT8 98 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 PYGO2Q9BRQ0 406 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 ZNF492Q9P255 531 aa8.65□□□□□ -1.02
SRP54-206ENST00000555317 TIMM8BQ9Y5J9 83 aaPredicted RBP8.65□□□□□ -1.02
SRP54-206ENST00000555317 RYR3Q15413 4870 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 IGHV4-4A0A075B6R2 117 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 TRBV7-9A0A0J9YWB2 115 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 SNURFLB1AK76 121 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 KLLNB2CW77 178 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 K7EQM0 130 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 RGS13O14921 159 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 BCL2L11O43521 198 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 DEFB130BP0DP73 79 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 DEFB130AP0DP74 79 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 CRISP2P16562 243 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 AZU1P20160 251 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 EIF5AP63241 154 aaKnown RBP8.64□□□□□ -1.03
SRP54-206ENST00000555317 BTN1A1Q13410 526 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
SRP54-206ENST00000555317 ZNF471Q9BX82 626 aaPredicted RBP8.64□□□□□ -1.03
SRP54-206ENST00000555317 CBY3A6NI87 242 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 CD300CQ08708 224 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 ARL6IP6Q8N6S5 226 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 C5orf17Q8NAS9 161 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 ZNF680Q8NEM1 530 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 RNASE8Q8TDE3 154 aaKnown RBP8.63□□□□□ -1.03
SRP54-206ENST00000555317 ST6GAL2Q96JF0 529 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 NDUFAF3Q9BU61 184 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 NOP10Q9NPE3 64 aaKnown RBP8.63□□□□□ -1.03
SRP54-206ENST00000555317 CYTL1Q9NRR1 136 aa8.63□□□□□ -1.03
SRP54-206ENST00000555317 RYR2Q92736 4967 aa8.62□□□□□ -1.03
SRP54-206ENST00000555317 SERTM2A0A1B0GWG4 89 aa8.62□□□□□ -1.03
SRP54-206ENST00000555317 EIF4E3Q8N5X7 224 aaKnown RBP8.62□□□□□ -1.03
SRP54-206ENST00000555317 OR11H4Q8NGC9 324 aa8.62□□□□□ -1.03
SRP54-206ENST00000555317 STOML3Q8TAV4 291 aa8.62□□□□□ -1.03
SRP54-206ENST00000555317 TMED6Q8WW62 240 aa8.62□□□□□ -1.03
SRP54-206ENST00000555317 NDFIP1Q9BT67 221 aa8.62□□□□□ -1.03
SRP54-206ENST00000555317 LENEPQ9Y5L5 61 aa8.62□□□□□ -1.03
SRP54-206ENST00000555317 hCG_2014768A0A024R1R8 64 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 MAP1LC3B2A6NCE7 125 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 FGF8P55075 233 aaPredicted RBP8.61□□□□□ -1.03
SRP54-206ENST00000555317 GNG5P63218 68 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
SRP54-206ENST00000555317 Q6ZNX1 250 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms