RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CGB7P0DN87 165 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 GZMHP20718 246 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 ERP29P30040 261 aaKnown RBP0.76□□□□□ -2.29
PRPF39-208ENST00000554785 NUP62P37198 522 aaPredicted RBP0.76□□□□□ -2.29
PRPF39-208ENST00000554785 CDC42P60953 191 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 RSU1Q15404 277 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 SNCBQ16143 134 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 MORN2Q502X0 79 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 Q56UQ5 140 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 IDNKQ5T6J7 187 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 GDF5OSQ5U4N7 250 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 CD200R1LQ6Q8B3 271 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF322Q6U7Q0 402 aaPredicted RBP0.76□□□□□ -2.29
PRPF39-208ENST00000554785 PRNTQ86SH4 94 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 BAP18Q8IXM2 172 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 Q8IYB0 196 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 HS3ST5Q8IZT8 346 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 OR2K2Q8NGT1 345 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 TEX47Q8TBZ9 253 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 MAFIPQ8WZ33 124 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 RHPN1-AS1Q9BWJ2 59 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 HINT2Q9BX68 163 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 SLC35B3Q9H1N7 401 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 OR2D2Q9H210 308 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 ABCB9Q9NP78 766 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 C12orf4Q9NQ89 552 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 WASHC3Q9Y3C0 194 aa0.76□□□□□ -2.29
PRPF39-208ENST00000554785 RBM7Q9Y580 266 aaKnown RBP0.76□□□□□ -2.29
PRPF39-208ENST00000554785 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.75□□□□□ -2.29
PRPF39-208ENST00000554785 A0A1B0GTI1 187 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM30CPA0ZSE6 113 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 OR5H14A6NHG9 310 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 A8MWP6 167 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 C9JQL5 133 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 K7EN84 100 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 M0R2Z0 102 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 SULT1B1O43704 296 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 ADAP1O75689 374 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 CXorf1O96002 111 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 IFNGP01579 166 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 IGHV3-53P01767 116 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 APOA2P02652 100 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 CDK1P06493 297 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 SAA1P0DJI8 122 aaPredicted RBP0.75□□□□□ -2.29
PRPF39-208ENST00000554785 ALOX5APP20292 161 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 HTR2BP41595 481 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 GZMMP51124 257 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF137PP52743 207 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 RPL37AP61513 92 aaKnown RBP0.75□□□□□ -2.29
PRPF39-208ENST00000554785 GPR176Q14439 515 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 WFDC2Q14508 124 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 KISS1Q15726 138 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 SPINK9Q5DT21 86 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 LAMTOR1Q6IAA8 161 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 OR10K2Q6IF99 312 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 Q6ZRN7 208 aaPredicted RBP0.75□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF833PQ6ZTB9 187 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 FA2HQ7L5A8 372 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 TCF24Q7RTU0 167 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 C6orf201Q7Z4U5 140 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 WFDC10BQ8IUB3 73 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 STX19Q8N4C7 294 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 LINC00337Q8N6G1 96 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 OR5H2Q8NGV7 314 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 RBPMSQ93062 196 aaKnown RBP0.75□□□□□ -2.29
PRPF39-208ENST00000554785 GALMQ96C23 342 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 GNPNAT1Q96EK6 184 aaPredicted RBP0.75□□□□□ -2.29
PRPF39-208ENST00000554785 TVP23CQ96ET8 276 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 USMG5Q96IX5 58 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 ADTRPQ96IZ2 230 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 OR2A7Q96R45 310 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 S100A13Q99584 98 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 MS4A6AQ9H2W1 248 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 VSIRQ9H7M9 311 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 SDHAF2Q9NX18 166 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 TVP23BQ9NYZ1 205 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 MRPL27Q9P0M9 148 aaKnown RBP0.75□□□□□ -2.29
PRPF39-208ENST00000554785 MRM2Q9UI43 246 aaKnown RBP0.75□□□□□ -2.29
PRPF39-208ENST00000554785 ANXA10Q9UJ72 324 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 GMEB1Q9Y692 573 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 R4GMQ9 66 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 V9GYS6 101 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 PKHD1L1Q86WI1 4243 aa0.75□□□□□ -2.29
PRPF39-208ENST00000554785 LOC389332A0A1B0GUA5 103 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 A0A1W2PQL4 384 aaPredicted RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 FAM223BA6NKX1 122 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 MCRIP1C9JLW8 97 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 RGS5O15539 181 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 CRTAPO75718 401 aaPredicted RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 SC5DO75845 299 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 FADS2O95864 444 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 RLN2P04090 185 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 RPSAP08865 295 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 P0C880 135 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 RBM11P57052 281 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 VSNL1P62760 191 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 TSPAN31Q12999 210 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 VAMP3Q15836 100 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 SSX1Q16384 188 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ESRGQ1W209 222 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms