RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OR5AK2Q8NH90 309 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 DPH3Q96FX2 82 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 NABP2Q9BQ15 211 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 Q9BRP9 147 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 SLC50A1Q9BRV3 221 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 SNRNP25Q9BV90 132 aaKnown RBP2.41□□□□□ -2.02
SCFD1-211ENST00000554437 RPL26L1Q9UNX3 145 aaKnown RBP2.41□□□□□ -2.02
SCFD1-211ENST00000554437 ZFP30Q9Y2G7 519 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 SCRIBQ14160 1630 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 PLXNB1O43157 2135 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 PTPRSQ13332 1948 aa2.4□□□□□ -2.02
SCFD1-211ENST00000554437 B4DSR2 109 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 UBL3O95164 117 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 CTSGP08311 255 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 MIFP14174 115 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 ETV6P41212 452 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 BTG2P78543 158 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 CDK6Q00534 326 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 C1orf134Q5TEV5 83 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 TEX261Q6UWH6 196 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 COPS9Q8WXC6 57 aa2.4□□□□□ -2.03
SCFD1-211ENST00000554437 CDK5RAP2Q96SN8 1893 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 TRAV12-2A0A075B6T6 113 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 IFITM5A6NNB3 132 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 IBA57-AS1B1ANH7 110 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 CCDC179H3BU77 68 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 ASB16-AS1Q495Z4 193 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 LINC01545Q5VT33 79 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 C8orf59Q8N0T1 100 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-211ENST00000554437 OTOSQ8NHW6 89 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 RAB37Q96AX2 223 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 MUCL1Q96DR8 90 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 CST11Q9H112 138 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 EML6Q6ZMW3 1958 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 CCDC88AQ3V6T2 1871 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 SEC16AO15027 2179 aa2.39□□□□□ -2.03
SCFD1-211ENST00000554437 SLX4Q8IY92 1834 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 SHROOM3Q8TF72 1996 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 IGLV10-54A0A075B6I4 117 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 ZNF736B4DX44 427 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-211ENST00000554437 FNDC10F2Z333 226 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 HIST1H1DP16402 221 aaKnown RBP2.38□□□□□ -2.03
SCFD1-211ENST00000554437 SSR2P43308 183 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 TPPP2P59282 170 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 ZNF846Q147U1 533 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 Q6ZUT4 128 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 GTF2H5Q6ZYL4 71 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 Q8N2B8 174 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 ACBD7Q8N6N7 88 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 TMEM254Q8TBM7 123 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 PRO2289Q9P1D8 64 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 CCL26Q9Y258 94 aa2.38□□□□□ -2.03
SCFD1-211ENST00000554437 GREB1Q4ZG55 1949 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 IGHV1-24A0A0C4DH33 117 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 TMEM218A2RU14 115 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 ZNF705FA8MVS1 300 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-211ENST00000554437 E7EUB6 86 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 M0R2P5 195 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 ASAH2BP0C7U1 165 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 DSCR4P56555 118 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-211ENST00000554437 RPL26P61254 145 aaKnown RBP2.37□□□□□ -2.03
SCFD1-211ENST00000554437 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 Q6ZTI0 123 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 KRTAP13-1Q8IUC0 172 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 Q96M85 177 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 SPANXDQ9BXN6 97 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 NAA60Q9H7X0 242 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 LHFPL6Q9Y693 200 aa2.37□□□□□ -2.03
SCFD1-211ENST00000554437 FOCADQ5VW36 1801 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 LOC107984156A0A0G2JMH3 177 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 M0R143 59 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 HYPMO75409 117 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 IFNA17P01571 189 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 CD2P06729 351 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 P0C880 135 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 GNG2P59768 71 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 ARPINQ7Z6K5 226 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 ARL17AQ8IVW1 177 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 PSMF1Q92530 271 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 TVP23CQ96ET8 276 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 SEC11CQ9BY50 192 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 AGPAT4-IT1Q9H0P7 198 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 IER3IP1Q9Y5U9 82 aa2.36□□□□□ -2.03
SCFD1-211ENST00000554437 COL5A1P20908 1838 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-211ENST00000554437 MYOM2P54296 1465 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 TRAV30A0A087WSZ9 112 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 C3orf85A0A1B0GTC6 90 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 TCRBV4S1A1TA0A5B7 111 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 A6NN06 94 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 C5orf67F2Z3F1 127 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 CCL25O15444 150 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 TNFP01375 233 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 IGLV6-57P01721 117 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 MIC13Q5XKP0 118 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 ATP11AUNQ6ZP68 121 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 SNX29P2Q8IUI4 249 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 ATP6V0E2Q8NHE4 81 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 SMIM7Q9BQ49 75 aa2.35□□□□□ -2.03
SCFD1-211ENST00000554437 MRPL57Q9BQC6 102 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms