RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 MRPS10P82664 201 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 KIR3DS1Q14943 382 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 ODF3L2Q3SX64 289 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM78Q5T7P6 136 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 DHRS11Q6UWP2 260 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 HSD17B13Q7Z5P4 300 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 BPIFA4PQ86YQ2 179 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 PTX4Q96A99 478 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SFRP2Q96HF1 295 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 SLC25A21Q9BQT8 299 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RTBDNQ9BSG5 229 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 ZNF471Q9BX82 626 aaPredicted RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 NXF2Q9GZY0 626 aaKnown RBP1.87□□□□□ -2.11
PRPF39-205ENST00000554081 C20orf85Q9H1P6 137 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 MAP6D1Q9H9H5 199 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 RFNGQ9Y644 331 aa1.87□□□□□ -2.11
PRPF39-205ENST00000554081 TRAV30A0A087WSZ9 112 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 IGKV2-40A0A087WW87 121 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 LINC00862A6NCI5 91 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 FAM90A26D6RGX4 464 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 F6UZH7 168 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 TSTD3H0UI37 97 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 SFT2D2O95562 160 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 IGKV2D-40P01614 121 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 CD1AP06126 327 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 SPART-AS1P0CW21 52 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 PET100P0DJ07 73 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 C8orf88P0DMB2 117 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 RPL7P18124 248 aaKnown RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 EWSR1Q01844 656 aaKnown RBP eCLIP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 MRPL23Q16540 153 aaKnown RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM183BQ1AE95 376 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 C19orf54Q5BKX5 351 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 FFAR4Q5NUL3 377 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 GPHB5Q86YW7 130 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM183AQ8IXX5 376 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 WFDC1Q9HC57 220 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 NPVFQ9HCQ7 196 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 TMEM14BQ9NUH8 114 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 TECRQ9NZ01 308 aaKnown RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 TRAV8-1A0A0A6YYK1 113 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 ANKRD20A5PA0PJZ0 165 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 GRIFINA4D1Z8 144 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 PGPA6NDG6 321 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 NPIPB5A8MRT5 1133 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 CDS2O95674 445 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 IGKV1-17P01599 117 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 IGLV2-14P01704 120 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 SLC25A4P12235 298 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 OPCMLQ14982 345 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 LGALSLQ3ZCW2 172 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 LINC01620Q4KN68 170 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 FAM71F2Q6NXP2 309 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 ZNF880Q6PDB4 577 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 KCNIP4Q6PIL6 250 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 GOLT1AQ6ZVE7 132 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 PRNTQ86SH4 94 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 Q8N2B8 174 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 OR1S2Q8NGQ3 325 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 IL17DQ8TAD2 202 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 PPP1R1CQ8WVI7 109 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 PCNPQ8WW12 178 aaKnown RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 GNPNAT1Q96EK6 184 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 C1QTNF4Q9BXJ3 329 aa1.86□□□□□ -2.11
PRPF39-205ENST00000554081 SLIRPQ9GZT3 109 aaKnown RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 ANK3Q12955 4377 aaKnown RBP1.86□□□□□ -2.11
PRPF39-205ENST00000554081 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-205ENST00000554081 TRBV6-6A0A0A6YYG2 114 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 C15orf62A8K5M9 175 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 M0R381 172 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 PPP1R2P9O14990 202 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 RBFOX2O43251 390 aaKnown RBP eCLIP1.85□□□□□ -2.11
PRPF39-205ENST00000554081 PRAF2O60831 178 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 RPL35P42766 123 aaKnown RBP1.85□□□□□ -2.11
PRPF39-205ENST00000554081 CCL18P55774 89 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 KRTAP19-4Q3LI73 84 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 ZFP69Q49AA0 526 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 OR10J3Q5JRS4 329 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 SOHLH1Q5JUK2 328 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 AKR1C8PQ5T2L2 129 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 Q6ZSR3 168 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 CYP2G1PQ6ZSU1 146 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 OR52E5Q8NH55 327 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 C2CD4CQ8TF44 421 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 DPH3P1Q9H4G8 78 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 DNAJC4Q9NNZ3 241 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 SLC39A9Q9NUM3 307 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 MRPL16Q9NX20 251 aaKnown RBP1.85□□□□□ -2.11
PRPF39-205ENST00000554081 PXMP4Q9Y6I8 212 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 KIR2DL5BA0A0G2JN68 375 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 KIR2DL5BA0A0G2JPC4 375 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 MBPP02686 304 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-205ENST00000554081 IGLC1P0CG04 106 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 VPREB1P12018 145 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 S100A7P31151 101 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 GNG5P63218 68 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 SERTAD4-AS1Q5TG53 156 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 CLPSL2Q6UWE3 100 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 LYPD6Q86Y78 171 aa1.85□□□□□ -2.11
PRPF39-205ENST00000554081 KIR2DL5AQ8N109 375 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 329.1 ms