RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 VWFP04275 2813 aa10.78□□□□□ -0.68
SHMT2-210ENST00000553950 AMBPP02760 352 aa10.77□□□□□ -0.69
SHMT2-210ENST00000553950 TSPOP30536 169 aa10.77□□□□□ -0.69
SHMT2-210ENST00000553950 LEPP41159 167 aa10.77□□□□□ -0.69
SHMT2-210ENST00000553950 GNG4P50150 75 aa10.77□□□□□ -0.69
SHMT2-210ENST00000553950 NUTF2P61970 127 aaKnown RBP10.77□□□□□ -0.69
SHMT2-210ENST00000553950 ACTL10Q5JWF8 245 aa10.77□□□□□ -0.69
SHMT2-210ENST00000553950 PSG8Q9UQ74 426 aa10.77□□□□□ -0.69
SHMT2-210ENST00000553950 A8MTW9 85 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 ZNF727A8MUV8 499 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 PRAC2D3DTV9 90 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 G3V4G9 280 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
SHMT2-210ENST00000553950 ZNF674Q2M3X9 581 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 CENPWQ5EE01 88 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 KPRPQ5T749 579 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-210ENST00000553950 NIPSNAP3BQ9BS92 247 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 ZNF492Q9P255 531 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 LY96Q9Y6Y9 160 aa10.76□□□□□ -0.69
SHMT2-210ENST00000553950 KRBOX1C9JBD0 128 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 F6UB75 175 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 H3BMM0 161 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 LTAP01374 205 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 CT45A10P0DMU9 189 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-210ENST00000553950 PRNTQ86SH4 94 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 APRG1Q8IVJ8 170 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 OR4B1Q8NGF8 309 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 CITED4Q96RK1 184 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 VGLL1Q99990 258 aa10.75□□□□□ -0.69
SHMT2-210ENST00000553950 TRAV8-1A0A0A6YYK1 113 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 TMEM218A2RU14 115 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 KNCNA6PVL3 124 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 PNRC1Q12796 327 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-210ENST00000553950 TRPT1Q86TN4 253 aaKnown RBP10.74□□□□□ -0.69
SHMT2-210ENST00000553950 BAGE2Q86Y30 109 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 IGF2BP2-AS1Q96M15 143 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 DERL1Q9BUN8 251 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 SEC11CQ9BY50 192 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 AGPAT4-IT1Q9H0P7 198 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 SRD5A3Q9H8P0 318 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 NAT8Q9UHE5 227 aa10.74□□□□□ -0.69
SHMT2-210ENST00000553950 AGRNO00468 2067 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 C9JQL5 133 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 F8W036 122 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 IGLV2-11P01706 119 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 CRISP2P16562 243 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 ERCC8Q13216 396 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 GDF5OSQ5U4N7 250 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 TMEM183AQ8IXX5 376 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 Q8TAT8 98 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 PRR25Q96S07 402 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 C1QTNF4Q9BXJ3 329 aa10.73□□□□□ -0.69
SHMT2-210ENST00000553950 CDKN1BP46527 198 aa10.72□□□□□ -0.69
SHMT2-210ENST00000553950 APOC4P55056 127 aa10.72□□□□□ -0.69
SHMT2-210ENST00000553950 SMUG1Q53HV7 270 aa10.72□□□□□ -0.69
SHMT2-210ENST00000553950 COX8CQ7Z4L0 72 aa10.72□□□□□ -0.69
SHMT2-210ENST00000553950 FAM19A4Q96LR4 140 aa10.72□□□□□ -0.69
SHMT2-210ENST00000553950 LINC00479Q96M42 142 aa10.72□□□□□ -0.69
SHMT2-210ENST00000553950 TUBA4BQ9H853 241 aa10.72□□□□□ -0.69
SHMT2-210ENST00000553950 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 A8MZ25 164 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 ZNF705DP0CH99 300 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-210ENST00000553950 ZNF705BP0CI00 300 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-210ENST00000553950 KRTAP10-11P60412 298 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 TMEM241Q24JQ0 296 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 Q8N1Y9 231 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 DEFB125Q8N687 156 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 KIR2DL5BQ8NHK3 375 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 C20orf144Q9BQM9 153 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 WFDC10AQ9H1F0 79 aa10.71□□□□□ -0.69
SHMT2-210ENST00000553950 LOC102724200A0A096LPH7 203 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-210ENST00000553950 INSP01308 110 aa10.7□□□□□ -0.7
SHMT2-210ENST00000553950 IGKV3-20P01619 116 aa10.7□□□□□ -0.7
SHMT2-210ENST00000553950 GPX1P07203 203 aa10.7□□□□□ -0.7
SHMT2-210ENST00000553950 DEFB1P60022 68 aa10.7□□□□□ -0.7
SHMT2-210ENST00000553950 ZNF124Q15973 351 aa10.7□□□□□ -0.7
SHMT2-210ENST00000553950 AMTNQ6UX39 209 aa10.7□□□□□ -0.7
SHMT2-210ENST00000553950 SGK494Q96LW2 274 aa10.7□□□□□ -0.7
SHMT2-210ENST00000553950 ASCL2Q99929 193 aa10.7□□□□□ -0.7
SHMT2-210ENST00000553950 CARHSP1Q9Y2V2 147 aaKnown RBP10.7□□□□□ -0.7
SHMT2-210ENST00000553950 TRBV20OR9-2A0A075B6H5 130 aa10.69□□□□□ -0.7
SHMT2-210ENST00000553950 KLLNB2CW77 178 aa10.69□□□□□ -0.7
SHMT2-210ENST00000553950 MGST1P10620 155 aaKnown RBP10.69□□□□□ -0.7
SHMT2-210ENST00000553950 SLC7A5P1Q8MH63 180 aa10.69□□□□□ -0.7
SHMT2-210ENST00000553950 TVP23CQ96ET8 276 aa10.69□□□□□ -0.7
SHMT2-210ENST00000553950 MLST8Q9BVC4 326 aa10.69□□□□□ -0.7
SHMT2-210ENST00000553950 CMYA5Q8N3K9 4069 aa10.69□□□□□ -0.7
SHMT2-210ENST00000553950 TRAV21A0A0B4J279 112 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 C7orf71A4D174 169 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 UBE2CO00762 179 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 IGHV4-30-4P0DP06 118 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 ADIRFQ15847 76 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 SPINK13Q1W4C9 94 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 C10orf91Q5T1B1 145 aa10.68□□□□□ -0.7
SHMT2-210ENST00000553950 FAM162BQ5T6X4 162 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms