RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 OR11H4Q8NGC9 324 aa13.28□□□□□ -0.28
PRPF40B-216ENST00000552301 HYLS1Q96M11 299 aa13.28□□□□□ -0.28
PRPF40B-216ENST00000552301 AGPAT4-IT1Q9H0P7 198 aa13.28□□□□□ -0.28
PRPF40B-216ENST00000552301 CYTL1Q9NRR1 136 aa13.28□□□□□ -0.28
PRPF40B-216ENST00000552301 SACSQ9NZJ4 4579 aa13.28□□□□□ -0.28
PRPF40B-216ENST00000552301 H7BYZ3 331 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 BCL2L11O43521 198 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 PFDN1O60925 122 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 CXorf1O96002 111 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 HTN1P15515 57 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 GCHFRP30047 84 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 NIPSNAP3BQ9BS92 247 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 ZNF471Q9BX82 626 aaPredicted RBP13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 YTHDF2Q9Y5A9 579 aaKnown RBP13.27□□□□□ -0.29
PRPF40B-216ENST00000552301 CTXND1A0A1B0GTU2 59 aa13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 PGPA6NDG6 321 aa13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 SLC25A5P05141 298 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 EIF5AP63241 154 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 KIR3DS1Q14943 382 aa13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 FAM222AQ5U5X8 452 aa13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 Q6ZTC4 211 aa13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 RYR2Q92736 4967 aa13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 VGLL1Q99990 258 aa13.26□□□□□ -0.29
PRPF40B-216ENST00000552301 STARD9Q9P2P6 4700 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 hCG_2014768A0A024R1R8 64 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 TRAV10A0A0B4J240 114 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 TRAV12-3A0A0B4J271 114 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 C7orf71A4D174 169 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 RBAKDNA6NC62 111 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 ZNF138P52744 262 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 ZNF767PQ75MW2 155 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 ST6GAL2Q96JF0 529 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 ZNF492Q9P255 531 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 DKK2Q9UBU2 259 aa13.25□□□□□ -0.29
PRPF40B-216ENST00000552301 LCE6AA0A183 80 aa13.24□□□□□ -0.29
PRPF40B-216ENST00000552301 DIRC3C9JPN6 131 aa13.24□□□□□ -0.29
PRPF40B-216ENST00000552301 GPX1P07203 203 aa13.24□□□□□ -0.29
PRPF40B-216ENST00000552301 C12orf74Q32Q52 190 aa13.24□□□□□ -0.29
PRPF40B-216ENST00000552301 CCDC28AQ8IWP9 274 aa13.24□□□□□ -0.29
PRPF40B-216ENST00000552301 TCTE3Q8IZS6 198 aa13.24□□□□□ -0.29
PRPF40B-216ENST00000552301 C2CD4CQ8TF44 421 aa13.24□□□□□ -0.29
PRPF40B-216ENST00000552301 C16orf74Q96GX8 76 aa13.24□□□□□ -0.29
PRPF40B-216ENST00000552301 PRM2P04554 102 aa13.23□□□□□ -0.29
PRPF40B-216ENST00000552301 CRISP2P16562 243 aa13.23□□□□□ -0.29
PRPF40B-216ENST00000552301 ZNF493Q6ZR52 646 aa13.23□□□□□ -0.29
PRPF40B-216ENST00000552301 TMUB2Q71RG4 321 aa13.23□□□□□ -0.29
PRPF40B-216ENST00000552301 ARL6IP6Q8N6S5 226 aa13.23□□□□□ -0.29
PRPF40B-216ENST00000552301 Q8TAT8 98 aa13.23□□□□□ -0.29
PRPF40B-216ENST00000552301 KLLNB2CW77 178 aa13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 NMBP08949 121 aa13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 RNASE4P34096 147 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 DAD1P61803 113 aa13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 AKAP14Q86UN6 197 aa13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 TMEM263Q8WUH6 116 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 FAM19A4Q96LR4 140 aa13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 PYGO2Q9BRQ0 406 aa13.22□□□□□ -0.29
PRPF40B-216ENST00000552301 DEFB131BA0A096LNP1 70 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 TRBV7-9A0A0J9YWB2 115 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 MAP1LC3B2A6NCE7 125 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 LYRM9A8MSI8 78 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 SEC11BP0C7V7 166 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 AZU1P20160 251 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 BTN1A1Q13410 526 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 ZNF726P1Q15940 193 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 C5orf17Q8NAS9 161 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 STOML3Q8TAV4 291 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 MAP1LC3BQ9GZQ8 125 aa13.21□□□□□ -0.29
PRPF40B-216ENST00000552301 IGLL5B9A064 214 aa13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 K7EQM0 130 aa13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 TPT1P13693 172 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 GNG5P63218 68 aa13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 CD300CQ08708 224 aa13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 ZFAND2AQ8N6M9 145 aa13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 LENEPQ9Y5L5 61 aa13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 CSMD3Q7Z407 3707 aa13.2□□□□□ -0.3
PRPF40B-216ENST00000552301 TENM2Q9NT68 2774 aa13.19□□□□□ -0.3
PRPF40B-216ENST00000552301 SERTM2A0A1B0GWG4 89 aa13.19□□□□□ -0.3
PRPF40B-216ENST00000552301 UMAD1C9J7I0 102 aa13.19□□□□□ -0.3
PRPF40B-216ENST00000552301 FGF8P55075 233 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-216ENST00000552301 RNASE8Q8TDE3 154 aaKnown RBP13.19□□□□□ -0.3
PRPF40B-216ENST00000552301 TMED6Q8WW62 240 aa13.19□□□□□ -0.3
PRPF40B-216ENST00000552301 TIMM8BQ9Y5J9 83 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-216ENST00000552301 A0A1W2PRE2 83 aa13.18□□□□□ -0.3
PRPF40B-216ENST00000552301 SNURFLB1AK76 121 aa13.18□□□□□ -0.3
PRPF40B-216ENST00000552301 RGS13O14921 159 aa13.18□□□□□ -0.3
PRPF40B-216ENST00000552301 C1QBP02746 253 aa13.18□□□□□ -0.3
PRPF40B-216ENST00000552301 HTN3P15516 51 aa13.18□□□□□ -0.3
PRPF40B-216ENST00000552301 TCTAP57738 103 aa13.18□□□□□ -0.3
PRPF40B-216ENST00000552301 SUMO1P63165 101 aaKnown RBP13.18□□□□□ -0.3
PRPF40B-216ENST00000552301 NDFIP1Q9BT67 221 aa13.18□□□□□ -0.3
PRPF40B-216ENST00000552301 CBY3A6NI87 242 aa13.17□□□□□ -0.3
PRPF40B-216ENST00000552301 DEFB130BP0DP73 79 aa13.17□□□□□ -0.3
PRPF40B-216ENST00000552301 DEFB130AP0DP74 79 aa13.17□□□□□ -0.3
PRPF40B-216ENST00000552301 UBE2G2P60604 165 aa13.17□□□□□ -0.3
PRPF40B-216ENST00000552301 PRR9Q5T870 116 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms