RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 E5RGE8 158 aa7□□□□□ -1.29
VPS29-208ENST00000550267 K7EQD1 137 aa7□□□□□ -1.29
VPS29-208ENST00000550267 RGS5O15539 181 aa7□□□□□ -1.29
VPS29-208ENST00000550267 CCNKO75909 580 aa7□□□□□ -1.29
VPS29-208ENST00000550267 SLC25A5P05141 298 aaKnown RBP7□□□□□ -1.29
VPS29-208ENST00000550267 RRAS2P62070 204 aaPredicted RBP7□□□□□ -1.29
VPS29-208ENST00000550267 SLC38A11Q08AI6 406 aa7□□□□□ -1.29
VPS29-208ENST00000550267 SLAQ13239 276 aa7□□□□□ -1.29
VPS29-208ENST00000550267 BTN1A1Q13410 526 aa7□□□□□ -1.29
VPS29-208ENST00000550267 ANXA2RQ3ZCQ2 193 aa7□□□□□ -1.29
VPS29-208ENST00000550267 MORN5Q5VZ52 161 aa7□□□□□ -1.29
VPS29-208ENST00000550267 LINC00305Q7Z4B0 112 aa7□□□□□ -1.29
VPS29-208ENST00000550267 VGLL1Q99990 258 aa7□□□□□ -1.29
VPS29-208ENST00000550267 MCUBQ9NWR8 336 aa7□□□□□ -1.29
VPS29-208ENST00000550267 TP53TG3Q9ULZ0 132 aa7□□□□□ -1.29
VPS29-208ENST00000550267 PXMP4Q9Y6I8 212 aa7□□□□□ -1.29
VPS29-208ENST00000550267 PIGBOS1A0A0B4J2F0 54 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 H3BQ15 152 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 CTDSP2O14595 271 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 CTDSPLO15194 276 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 C1QBP02746 253 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 IGLC2P0DOY2 106 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 SRIP30626 198 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 CD300CQ08708 224 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 ERCC8Q13216 396 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 IL18Q14116 193 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 BPIFA4PQ86YQ2 179 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 C10orf126Q8N4M7 172 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 LRTM2Q8N967 370 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 SAT2Q96F10 170 aaPredicted RBP6.99□□□□□ -1.29
VPS29-208ENST00000550267 MRPL32Q9BYC8 188 aaKnown RBP6.99□□□□□ -1.29
VPS29-208ENST00000550267 RABL2BQ9UNT1 228 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 RNF24Q9Y225 148 aa6.99□□□□□ -1.29
VPS29-208ENST00000550267 RCL1Q9Y2P8 373 aaKnown RBP6.99□□□□□ -1.29
VPS29-208ENST00000550267 TRGV4A0A0C4DH28 118 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 K7EPK0 472 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 HOXB5P09067 269 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 RNASE4P34096 147 aaKnown RBP6.98□□□□□ -1.29
VPS29-208ENST00000550267 POLR2GP62487 172 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS29-208ENST00000550267 ZNF415Q09FC8 603 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 OPCMLQ14982 345 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 CTF1Q16619 201 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 IBA57Q5T440 356 aaKnown RBP6.98□□□□□ -1.29
VPS29-208ENST00000550267 Q6ZSA8 131 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 NPVFQ9HCQ7 196 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 PSENENQ9NZ42 101 aa6.98□□□□□ -1.29
VPS29-208ENST00000550267 KLLNB2CW77 178 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 GOSR2O14653 212 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 COX7A2P2O60397 106 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 MPDU1O75352 247 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 OXTP01178 125 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 SFTA3P0C7M3 94 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 GYPEP15421 78 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 TMEM128Q5BJH2 165 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 PXDC1Q5TGL8 231 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 Q6ZQT7 251 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 PCNPQ8WW12 178 aaKnown RBP6.97□□□□□ -1.29
VPS29-208ENST00000550267 TMEM37Q8WXS4 190 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 FAM19A4Q96LR4 140 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 Q9HAA7 133 aa6.97□□□□□ -1.29
VPS29-208ENST00000550267 CCDC59Q9P031 241 aaKnown RBP6.97□□□□□ -1.29
VPS29-208ENST00000550267 TRAV5A0A0B4J249 113 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 IBA57-AS1B1ANH7 110 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 M0R3E3 92 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 AGPAT2O15120 278 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 OR4E1P0C645 316 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 METTL15P1P0C7V9 234 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.3
VPS29-208ENST00000550267 WFDC2Q14508 124 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 C4orf46Q504U0 113 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 ZNF546Q86UE3 836 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 DIRAS2Q96HU8 199 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 ZNF479Q96JC4 524 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 ARPC5LQ9BPX5 153 aa6.96□□□□□ -1.3
VPS29-208ENST00000550267 IGHV1OR15-1A0A075B7D0 117 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 IGHV3-38A0A0C4DH36 116 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 FNDC10F2Z333 226 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 SSSCA1O60232 199 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 SFT2D2O95562 160 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 ORM1P02763 201 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 GPX1P07203 203 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 PPP1R1AQ13522 171 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 GUK1Q16774 197 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 PRR9Q5T870 116 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 C10orf113Q5VZT2 155 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 AGPAT4-IT1Q9H0P7 198 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 MGAT4CQ9UBM8 478 aa6.95□□□□□ -1.3
VPS29-208ENST00000550267 LOC100131303A0A0U1RQF7 123 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 CRISP2P16562 243 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
VPS29-208ENST00000550267 ARL16Q0P5N6 197 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 LINC01620Q4KN68 170 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 TMEM14EPQ6UXP3 125 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 IQCF2Q8IXL9 164 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 OR10P1Q8NGE3 313 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 BLNKQ8WV28 456 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 MRPL53Q96EL3 112 aaKnown RBP6.94□□□□□ -1.3
VPS29-208ENST00000550267 SMIM8Q96KF7 97 aa6.94□□□□□ -1.3
VPS29-208ENST00000550267 LINC00477Q96M19 166 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms