RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 NDUFB8O95169 186 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 COX6CP09669 75 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 ZNF491Q8N8L2 437 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 SYT8Q8NBV8 401 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 DSCAML1Q8TD84 2053 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 H3BRN7 92 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 EMP1P54849 157 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 LINC00310P59036 64 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 LINC00322Q6ZN03 302 aaPredicted RBP8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 Q8N7P7 452 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 UNC80Q8N2C7 3258 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 PPP1R17O96001 155 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 SRD5A1P18405 259 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 C14orf178Q8N769 122 aaPredicted RBP8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 VGLL1Q99990 258 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 SPRY4Q9C004 299 aa8.11□□□□□ -1.11
SMARCC2-209ENST00000550164 TRAV21A0A0B4J279 112 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 NDUFS7O75251 213 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 HLA-DMBP28068 263 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 CTRLP40313 264 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 SCRT2Q9NQ03 307 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 A0A1W2PPM0 123 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 LINC01545Q5VT33 79 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 TLN1Q9Y490 2541 aaKnown RBP8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 TRAV26-2A0A0B4J265 109 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 CEACAM4O75871 244 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 IGKV1-17P01599 117 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 FAM106AQ4KMX7 169 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 TMEM219Q86XT9 240 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 CEP192Q8TEP8 1941 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 CSPG4Q6UVK1 2322 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 CD7P09564 240 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 IL17RELQ6ZVW7 336 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 NEU4Q8WWR8 484 aaPredicted RBP8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 DPF1Q92782 380 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 PGPEP1Q9NXJ5 209 aa8.1□□□□□ -1.11
SMARCC2-209ENST00000550164 PLNP26678 52 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 CR1LQ2VPA4 569 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 LINC01559Q495D7 138 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 TTC32Q5I0X7 151 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 ZNF562Q6V9R5 426 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 SIGLEC15Q6ZMC9 328 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 TTTY13Q9BZ97 58 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 MRPL35Q9NZE8 188 aaKnown RBP8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 IGHV3-64A0A075B6Q5 118 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 H7C1H1 209 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 PAX8Q06710 450 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 AMTNQ6UX39 209 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 TMEM190Q8WZ59 177 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 KLF12Q9Y4X4 402 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 OTOGLQ3ZCN5 2332 aa8.09□□□□□ -1.11
SMARCC2-209ENST00000550164 K7EM74 188 aa8.09□□□□□ -1.12
SMARCC2-209ENST00000550164 CGB3P0DN86 165 aa8.09□□□□□ -1.12
SMARCC2-209ENST00000550164 CGB7P0DN87 165 aa8.09□□□□□ -1.12
SMARCC2-209ENST00000550164 EGR2P11161 476 aaPredicted RBP8.09□□□□□ -1.12
SMARCC2-209ENST00000550164 SPOCK3Q9BQ16 436 aa8.09□□□□□ -1.12
SMARCC2-209ENST00000550164 TNRC6AQ8NDV7 1962 aaKnown RBP8.09□□□□□ -1.12
SMARCC2-209ENST00000550164 PTPRQQ9UMZ3 2332 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 GATA1P15976 413 aaPredicted RBP8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 SP5Q6BEB4 398 aaPredicted RBP8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 TSSC4Q9Y5U2 329 aaPredicted RBP8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 C2CD3Q4AC94 2353 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 IGKV1D-37A0A075B6S9 117 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 TRAV8-2A0A0B4J237 113 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 EFNA4P52798 201 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 PRSS33Q8NF86 280 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 MSRB1Q9NZV6 116 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 FAM208BQ5VWN6 2430 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 NPIPB6E9PJ23 425 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 THBDP07204 575 aa8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 SRSF8Q9BRL6 282 aaKnown RBP8.08□□□□□ -1.12
SMARCC2-209ENST00000550164 TRAV2A0A0B4J234 112 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 A0A1B0GXF2 115 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 H3BMG7 143 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 C3orf36Q3SXR2 165 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 PRR30Q53SZ7 412 aaPredicted RBP8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 DTX2Q86UW9 622 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 MBD6Q96DN6 1003 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 K7EMI3 77 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 SEM1Q6ZVN7 128 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 ACACBO00763 2458 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 SNCGO76070 127 aa8.07□□□□□ -1.12
SMARCC2-209ENST00000550164 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 GEMIN7Q9H840 131 aaKnown RBP8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 A8MWV9 139 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 PRTN3P24158 256 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 Q8N8P6 123 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 C1orf159Q96HA4 380 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 CSTL1Q9H114 145 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 C19orf71A6NCJ1 209 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 G3V318 75 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 NDUFS8O00217 210 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 SNRPD3P62318 126 aaKnown RBP8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 DLX4Q92988 240 aaPredicted RBP8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 DPH3P1Q9H4G8 78 aa8.06□□□□□ -1.12
SMARCC2-209ENST00000550164 IGHV3OR16-12A0A075B7B8 117 aa8.05□□□□□ -1.12
SMARCC2-209ENST00000550164 IGLV2-23P01705 113 aa8.05□□□□□ -1.12
SMARCC2-209ENST00000550164 IGHV4-39P01824 125 aa8.05□□□□□ -1.12
SMARCC2-209ENST00000550164 LOXL1Q08397 574 aaPredicted RBP8.05□□□□□ -1.12
SMARCC2-209ENST00000550164 PLA2G2CQ5R387 149 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms