RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CSN1S1P47710 185 aa12.25□□□□□ -0.45
CHMP1A-208ENST00000550102 PQLC2Q6ZP29 291 aa12.25□□□□□ -0.45
CHMP1A-208ENST00000550102 OR2G3Q8NGZ4 309 aa12.25□□□□□ -0.45
CHMP1A-208ENST00000550102 RNASE8Q8TDE3 154 aaKnown RBP12.25□□□□□ -0.45
CHMP1A-208ENST00000550102 FAM210BQ96KR6 192 aa12.25□□□□□ -0.45
CHMP1A-208ENST00000550102 AGPAT4-IT1Q9H0P7 198 aa12.25□□□□□ -0.45
CHMP1A-208ENST00000550102 Q9H3A6 140 aa12.25□□□□□ -0.45
CHMP1A-208ENST00000550102 C7orf71A4D174 169 aa12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 RNF222A6NCQ9 220 aa12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 RANP62826 216 aaKnown RBP12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 CCDC28AQ8IWP9 274 aa12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 OR10G4Q8NGN3 311 aa12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 OR10G9Q8NGN4 311 aa12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 OR10G7Q8NGN6 311 aa12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 TNFSF18Q9UNG2 199 aa12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 TIMM8BQ9Y5J9 83 aaPredicted RBP12.24□□□□□ -0.45
CHMP1A-208ENST00000550102 KLLNB2CW77 178 aa12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 EIF3GO75821 320 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 DEFB130BP0DP73 79 aa12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 DEFB130AP0DP74 79 aa12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 CRISP2P16562 243 aa12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 ATP6V0CP27449 155 aa12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 CDC34P49427 236 aaPredicted RBP12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 FAM19A4Q96LR4 140 aa12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 VGLL1Q99990 258 aa12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 PYGO2Q9BRQ0 406 aa12.23□□□□□ -0.45
CHMP1A-208ENST00000550102 BORCS7-ASMTA0A0B4J1R7 106 aa12.22□□□□□ -0.45
CHMP1A-208ENST00000550102 RBAKDNA6NC62 111 aa12.22□□□□□ -0.45
CHMP1A-208ENST00000550102 NMBP08949 121 aa12.22□□□□□ -0.45
CHMP1A-208ENST00000550102 MBP02144 154 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 GPX1P07203 203 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 ARL14EPLP0DKL9 152 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 ZNF138P52744 262 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 SERF2P84101 59 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 BTN1A1Q13410 526 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 FAM74A1Q5RGS3 127 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 Q8TAT8 98 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 GNPNAT1Q96EK6 184 aaPredicted RBP12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 SH3BGRL3Q9H299 93 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 OTORQ9NRC9 128 aa12.21□□□□□ -0.45
CHMP1A-208ENST00000550102 TRBV7-9A0A0J9YWB2 115 aa12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 G3V3Q6 166 aa12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 HMGB3O15347 200 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 RNASE4P34096 147 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 CD300CQ08708 224 aa12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 RPL7L1Q6DKI1 246 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 ZFAND2AQ8N6M9 145 aa12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 CMTM2Q8TAZ6 248 aa12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 RXFP4Q8TDU9 374 aa12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 NOP10Q9NPE3 64 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 ZNF492Q9P255 531 aa12.2□□□□□ -0.46
CHMP1A-208ENST00000550102 SNURFLB1AK76 121 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 ATP5G1P05496 136 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 P0DMU3 169 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 FAM231AP0DMU4 169 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 FAM231CP0DMU5 169 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 ATP5G3P48201 142 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 TMEM88Q6PEY1 159 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 ZNF680Q8NEM1 530 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 HYLS1Q96M11 299 aa12.19□□□□□ -0.46
CHMP1A-208ENST00000550102 VPS13DQ5THJ4 4388 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 ARPC5O15511 151 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 STAG3L2P0CL84 134 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 STAG3L3P0CL85 134 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 PRR9Q5T870 116 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 RAB24Q969Q5 203 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 LINC00467Q9BRT7 94 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 RPH3ALQ9UNE2 315 aa12.18□□□□□ -0.46
CHMP1A-208ENST00000550102 PGPA6NDG6 321 aa12.17□□□□□ -0.46
CHMP1A-208ENST00000550102 CBY3A6NI87 242 aa12.17□□□□□ -0.46
CHMP1A-208ENST00000550102 ZNF324O75467 553 aaPredicted RBP12.17□□□□□ -0.46
CHMP1A-208ENST00000550102 EIF4E3Q8N5X7 224 aaKnown RBP12.17□□□□□ -0.46
CHMP1A-208ENST00000550102 ACTR3CQ9C0K3 210 aaPredicted RBP12.17□□□□□ -0.46
CHMP1A-208ENST00000550102 LENEPQ9Y5L5 61 aa12.17□□□□□ -0.46
CHMP1A-208ENST00000550102 F5H768 121 aa12.16□□□□□ -0.46
CHMP1A-208ENST00000550102 TAAR5O14804 337 aa12.16□□□□□ -0.46
CHMP1A-208ENST00000550102 RGS13O14921 159 aa12.16□□□□□ -0.46
CHMP1A-208ENST00000550102 GCHFRP30047 84 aa12.16□□□□□ -0.46
CHMP1A-208ENST00000550102 ARL6IP6Q8N6S5 226 aa12.16□□□□□ -0.46
CHMP1A-208ENST00000550102 C15orf53Q8NAA6 179 aa12.16□□□□□ -0.46
CHMP1A-208ENST00000550102 TMED6Q8WW62 240 aa12.16□□□□□ -0.46
CHMP1A-208ENST00000550102 KMT2AQ03164 3969 aa12.16□□□□□ -0.46
CHMP1A-208ENST00000550102 CXorf1O96002 111 aa12.15□□□□□ -0.46
CHMP1A-208ENST00000550102 DAZ2Q13117 558 aaKnown RBP12.15□□□□□ -0.46
CHMP1A-208ENST00000550102 ANXA2RQ3ZCQ2 193 aa12.15□□□□□ -0.46
CHMP1A-208ENST00000550102 GOLT1AQ6ZVE7 132 aa12.15□□□□□ -0.46
CHMP1A-208ENST00000550102 LINC00612Q8N6U2 182 aa12.15□□□□□ -0.46
CHMP1A-208ENST00000550102 DNAH6Q9C0G6 4158 aa12.15□□□□□ -0.46
CHMP1A-208ENST00000550102 NACAE9PAV3 2078 aa12.14□□□□□ -0.47
CHMP1A-208ENST00000550102 SMLR1H3BR10 107 aa12.14□□□□□ -0.47
CHMP1A-208ENST00000550102 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
CHMP1A-208ENST00000550102 POM121L12Q8N7R1 296 aa12.14□□□□□ -0.47
CHMP1A-208ENST00000550102 C11orf72Q8NBR9 251 aa12.14□□□□□ -0.47
CHMP1A-208ENST00000550102 ST6GAL2Q96JF0 529 aa12.14□□□□□ -0.47
CHMP1A-208ENST00000550102 GSN-AS1Q9NRJ2 163 aa12.14□□□□□ -0.47
CHMP1A-208ENST00000550102 TMEM167BQ9NRX6 74 aa12.14□□□□□ -0.47
CHMP1A-208ENST00000550102 IGHV1OR15-1A0A075B7D0 117 aa12.13□□□□□ -0.47
CHMP1A-208ENST00000550102 GAGE12BA1L429 117 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms