RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 ACTL10Q5JWF8 245 aa7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 C9orf47Q6ZRZ4 202 aa7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 Q8N1Y9 231 aa7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 FAM24BQ8N5W8 94 aa7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 FMC1Q96HJ9 113 aa7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 AURKAIP1Q9NWT8 199 aaPredicted RBP7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 YTHDF2Q9Y5A9 579 aaKnown RBP7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 SELENOKQ9Y6D0 94 aa7.25□□□□□ -1.25
SMARCD1-206ENST00000549274 NBEAL1Q6ZS30 2694 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 TRBV6-1A0A0K0K1D8 114 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 LOC102723971A0A1B0GUV8 181 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 NPIPB6E9PJ23 425 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 H3BMM0 161 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 M0R3E3 92 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 SNRPCP09234 159 aaKnown RBP7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 AKR1C3P42330 323 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 ZNF138P52744 262 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 IFITM2Q01629 132 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 HAGHQ16775 308 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 SAPCD1Q5SSQ6 148 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 CCDC28AQ8IWP9 274 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 C11orf52Q96A22 123 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 SMIM12Q96EX1 92 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 C20orf173Q96LM9 149 aa7.24□□□□□ -1.25
SMARCD1-206ENST00000549274 IGHV4-30-4P0DP06 118 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 TAS2R60P59551 318 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 CCL20P78556 96 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 TOR2AQ5JU69 321 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 IGFL4Q6B9Z1 124 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 GOLT1AQ6ZVE7 132 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 TRPT1Q86TN4 253 aaKnown RBP7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 APRG1Q8IVJ8 170 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 DEFB125Q8N687 156 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 OR4B1Q8NGF8 309 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 C20orf144Q9BQM9 153 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 BIN3Q9NQY0 253 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 RPH3ALQ9UNE2 315 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 ZFP30Q9Y2G7 519 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 NOTCH1P46531 2555 aa7.23□□□□□ -1.25
SMARCD1-206ENST00000549274 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 HLA-DMBP28068 263 aa7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 CDKN1BP46527 198 aa7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 ATP5G3P48201 142 aa7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 FLI1Q01543 452 aaPredicted RBP7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 FAM74A3Q4VXF1 159 aa7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 UQCC3Q6UW78 93 aa7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 CSTL1Q9H114 145 aa7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 ZNF492Q9P255 531 aa7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 KLF12Q9Y4X4 402 aa7.22□□□□□ -1.25
SMARCD1-206ENST00000549274 AGRNO00468 2067 aa7.21□□□□□ -1.25
SMARCD1-206ENST00000549274 IGKV2-40A0A087WW87 121 aaPredicted RBP7.21□□□□□ -1.26
SMARCD1-206ENST00000549274 KNCNA6PVL3 124 aa7.21□□□□□ -1.26
SMARCD1-206ENST00000549274 IGKV2D-40P01614 121 aaPredicted RBP7.21□□□□□ -1.26
SMARCD1-206ENST00000549274 CRISP2P16562 243 aa7.21□□□□□ -1.26
SMARCD1-206ENST00000549274 TMEM183BQ1AE95 376 aa7.21□□□□□ -1.26
SMARCD1-206ENST00000549274 TMEM256Q8N2U0 113 aa7.21□□□□□ -1.26
SMARCD1-206ENST00000549274 MRAPQ8TCY5 172 aa7.21□□□□□ -1.26
SMARCD1-206ENST00000549274 SCO2A0A1W2PP80 73 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 F6UB75 175 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 INSP01308 110 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 CT45A10P0DMU9 189 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 NDUFA5Q16718 116 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 SMUG1Q53HV7 270 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 DEFB121Q5J5C9 76 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 Q6ZWC4 215 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 C2CD4CQ8TF44 421 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 IGF2BP2-AS1Q96M15 143 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 AGPAT4-IT1Q9H0P7 198 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 SLC35B3Q9H1N7 401 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 TREM1Q9NP99 234 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 PSG8Q9UQ74 426 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 TP53TG1Q9Y2A0 90 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 GOLT1BQ9Y3E0 138 aa7.2□□□□□ -1.26
SMARCD1-206ENST00000549274 LINC00862A6NCI5 91 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 C9JCJ5 164 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 PRAC2D3DTV9 90 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 K7EIL1 84 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 CA1P00915 261 aaPredicted RBP7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 IGKV3-20P01619 116 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 GPX1P07203 203 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 RPL35AP18077 110 aaKnown RBP7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 RPL35P42766 123 aaKnown RBP7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 GNG4P50150 75 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 GNG5P63218 68 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 GDF5OSQ5U4N7 250 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 PRNTQ86SH4 94 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 Q86TA4 180 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 EIF4E3Q8N5X7 224 aaKnown RBP7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 VGLL1Q99990 258 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 NIPSNAP3BQ9BS92 247 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 WFDC10AQ9H1F0 79 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 LY96Q9Y6Y9 160 aa7.19□□□□□ -1.26
SMARCD1-206ENST00000549274 C7orf71A4D174 169 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 RBMY1BA6NDE4 496 aaKnown RBP7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 RBMY1EA6NEQ0 496 aaKnown RBP7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 KLLNB2CW77 178 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 LTAP01374 205 aa7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 RBMY1DP0C7P1 496 aaKnown RBP7.18□□□□□ -1.26
SMARCD1-206ENST00000549274 FRMD6-AS1P0C7T7 363 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms