RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TMEM263Q8WUH6 116 aaKnown RBP4.7□□□□□ -1.66
SCAF11-211ENST00000547950 BLNKQ8WV28 456 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 PFDN5Q99471 154 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 LYRM2Q9NU23 88 aaPredicted RBP4.7□□□□□ -1.66
SCAF11-211ENST00000547950 TIMM9Q9Y5J7 89 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 FRAS1Q86XX4 4008 aa4.7□□□□□ -1.66
SCAF11-211ENST00000547950 TRBV19A0A075B6N1 114 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 A0A0J9YY99 117 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 SNURFLB1AK76 121 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 M0R3E3 92 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 RLN2P04090 185 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 PYYP10082 97 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 RNASE4P34096 147 aaKnown RBP4.69□□□□□ -1.66
SCAF11-211ENST00000547950 FAM3BP58499 235 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-211ENST00000547950 LRRC37A5PQ49AS3 106 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 GCSAMLQ5JQS6 135 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 EXOC3-AS1Q8N2X6 119 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 THAP6Q8TBB0 222 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 ENKURQ8TC29 256 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 S100ZQ8WXG8 99 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 C20orf144Q9BQM9 153 aa4.69□□□□□ -1.66
SCAF11-211ENST00000547950 TRAV26-1A0A087WT03 109 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 NBDYA0A0U1RRE5 68 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 ZNF253O75346 499 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 NDUFB4O95168 129 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 HIST1H1EP10412 219 aaKnown RBP4.68□□□□□ -1.66
SCAF11-211ENST00000547950 CD300CQ08708 224 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 ASAH1Q13510 395 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 ICAM4Q14773 271 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 FAM122CQ6P4D5 195 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 MIR17HGQ75NE6 70 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 SSX7Q7RTT5 188 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 OR5C1Q8NGR4 320 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 ZNRF2Q8NHG8 242 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 CHAC2Q8WUX2 184 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 GNPNAT1Q96EK6 184 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-211ENST00000547950 LINC00477Q96M19 166 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 NPCDR1Q9BY65 106 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 SLC25A31Q9H0C2 315 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 AGPAT4-IT1Q9H0P7 198 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 AAMDCQ9H7C9 122 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 GSN-AS1Q9NRJ2 163 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 OR5AC2Q9NZP5 309 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 TMEM14CQ9P0S9 112 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 PRELID1Q9Y255 219 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 LINC00588Q9Y4M8 146 aa4.68□□□□□ -1.66
SCAF11-211ENST00000547950 TRGV2A0A075B6R0 118 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 IGKV2-40A0A087WW87 121 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-211ENST00000547950 C7orf71A4D174 169 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 E5RGE8 158 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 INMT-MINDY4F8WBC2 141 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 H0YIZ8 118 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 MPDU1O75352 247 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 UPK1BO75841 260 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 IGKV2D-40P01614 121 aaPredicted RBP4.67□□□□□ -1.66
SCAF11-211ENST00000547950 SLC25A5P05141 298 aaKnown RBP4.67□□□□□ -1.66
SCAF11-211ENST00000547950 GPX1P07203 203 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 NBEAP1P0C6P0 100 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 M6PRP20645 277 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 BTN1A1Q13410 526 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 LINC00299Q6ZSB3 139 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 Q6ZTI0 123 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 ZNF575Q86XF7 245 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 MRPL53Q96EL3 112 aaKnown RBP4.67□□□□□ -1.66
SCAF11-211ENST00000547950 ODF3Q96PU9 254 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 VGLL1Q99990 258 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 PYGO2Q9BRQ0 406 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 SLC25A2Q9BXI2 301 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 OR51M1Q9H341 326 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 Q9H8V8 135 aa4.67□□□□□ -1.66
SCAF11-211ENST00000547950 TRGV1A0A0A0MS02 117 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 SSNA1O43805 119 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 ZNF324O75467 553 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-211ENST00000547950 OR10J4P0C629 311 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 RANP62826 216 aaKnown RBP4.66□□□□□ -1.66
SCAF11-211ENST00000547950 CYCSP99999 105 aaKnown RBP4.66□□□□□ -1.66
SCAF11-211ENST00000547950 IFITM3Q01628 133 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 DAZ2Q13117 558 aaKnown RBP4.66□□□□□ -1.66
SCAF11-211ENST00000547950 PDE6HQ13956 83 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 ESRGQ1W209 222 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 TMEM78Q5T7P6 136 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 Q6ZQT7 251 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 C6orf223Q8N319 242 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 EIF4E3Q8N5X7 224 aaKnown RBP4.66□□□□□ -1.66
SCAF11-211ENST00000547950 LINC00612Q8N6U2 182 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 SYT8Q8NBV8 401 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 RXFP4Q8TDU9 374 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 FAM167A-AS1Q96KT0 104 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 PAXXQ9BUH6 204 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 NMES1Q9C002 83 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 WDR61Q9GZS3 305 aaKnown RBP4.66□□□□□ -1.66
SCAF11-211ENST00000547950 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 KLF12Q9Y4X4 402 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 DNAH2Q9P225 4427 aa4.66□□□□□ -1.66
SCAF11-211ENST00000547950 HECTD4Q9Y4D8 3996 aa4.65□□□□□ -1.66
SCAF11-211ENST00000547950 KLLNB2CW77 178 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 C17orf112F2Z3M2 114 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 OR7C2O60412 319 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 PRAF2O60831 178 aa4.65□□□□□ -1.67
SCAF11-211ENST00000547950 CSN1S1P47710 185 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms