RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 TMEM14CQ9P0S9 112 aa12.88□□□□□ -0.35
CHERP-204ENST00000546538 SNURFLB1AK76 121 aa12.87□□□□□ -0.35
CHERP-204ENST00000546538 CDK2AP2O75956 126 aa12.87□□□□□ -0.35
CHERP-204ENST00000546538 H2AFB2P0C5Z0 115 aa12.87□□□□□ -0.35
CHERP-204ENST00000546538 EXOC3-AS1Q8N2X6 119 aa12.87□□□□□ -0.35
CHERP-204ENST00000546538 MRPL53Q96EL3 112 aaKnown RBP12.87□□□□□ -0.35
CHERP-204ENST00000546538 Q9H3A6 140 aa12.87□□□□□ -0.35
CHERP-204ENST00000546538 C7orf71A4D174 169 aa12.86□□□□□ -0.35
CHERP-204ENST00000546538 H3BNG1 76 aa12.86□□□□□ -0.35
CHERP-204ENST00000546538 SLC25A5P05141 298 aaKnown RBP12.86□□□□□ -0.35
CHERP-204ENST00000546538 FGF7P21781 194 aa12.86□□□□□ -0.35
CHERP-204ENST00000546538 S100A11P31949 105 aa12.86□□□□□ -0.35
CHERP-204ENST00000546538 FAM167A-AS1Q96KT0 104 aa12.86□□□□□ -0.35
CHERP-204ENST00000546538 SLC25A2Q9BXI2 301 aa12.86□□□□□ -0.35
CHERP-204ENST00000546538 A0A096LPF7 62 aa12.85□□□□□ -0.35
CHERP-204ENST00000546538 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
CHERP-204ENST00000546538 KRTAP10-2P60368 255 aa12.85□□□□□ -0.35
CHERP-204ENST00000546538 NPCDR1Q9BY65 106 aa12.85□□□□□ -0.35
CHERP-204ENST00000546538 MRPS16Q9Y3D3 137 aaKnown RBP12.85□□□□□ -0.35
CHERP-204ENST00000546538 KLF12Q9Y4X4 402 aa12.85□□□□□ -0.35
CHERP-204ENST00000546538 PVALBP20472 110 aaPredicted RBP12.84□□□□□ -0.35
CHERP-204ENST00000546538 NHLH2Q02577 135 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 SPATA12Q7Z6I5 190 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 ZFAND2AQ8N6M9 145 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 BLNKQ8WV28 456 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 C18orf15Q96N68 181 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 VGLL1Q99990 258 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 TP53TG3Q9ULZ0 132 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 FAT1Q14517 4588 aa12.84□□□□□ -0.35
CHERP-204ENST00000546538 IGKV2-40A0A087WW87 121 aaPredicted RBP12.83□□□□□ -0.36
CHERP-204ENST00000546538 IGKV2D-40P01614 121 aaPredicted RBP12.83□□□□□ -0.36
CHERP-204ENST00000546538 CRISP2P16562 243 aa12.83□□□□□ -0.36
CHERP-204ENST00000546538 C9orf47Q6ZRZ4 202 aa12.83□□□□□ -0.36
CHERP-204ENST00000546538 MIR17HGQ75NE6 70 aa12.83□□□□□ -0.36
CHERP-204ENST00000546538 STX12Q86Y82 276 aa12.83□□□□□ -0.36
CHERP-204ENST00000546538 CCDC32Q9BV29 185 aa12.83□□□□□ -0.36
CHERP-204ENST00000546538 GPN1Q9HCN4 374 aaPredicted RBP12.83□□□□□ -0.36
CHERP-204ENST00000546538 RNASE4P34096 147 aaKnown RBP12.82□□□□□ -0.36
CHERP-204ENST00000546538 PDE6HQ13956 83 aa12.82□□□□□ -0.36
CHERP-204ENST00000546538 ANXA2RQ3ZCQ2 193 aa12.82□□□□□ -0.36
CHERP-204ENST00000546538 THAP6Q8TBB0 222 aa12.82□□□□□ -0.36
CHERP-204ENST00000546538 H0YIZ8 118 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 SPINK4O60575 86 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 SIX6O95475 246 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 HBG1P69891 147 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 HBG2P69892 147 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 ICAM4Q14773 271 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 ATP6V1FQ16864 119 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 EIF4E3Q8N5X7 224 aaKnown RBP12.81□□□□□ -0.36
CHERP-204ENST00000546538 MAPKAPK5-AS1Q8N8E1 139 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 LINC00477Q96M19 166 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 OR5AC2Q9NZP5 309 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 TIMM9Q9Y5J7 89 aa12.81□□□□□ -0.36
CHERP-204ENST00000546538 TRGV1A0A0A0MS02 117 aa12.8□□□□□ -0.36
CHERP-204ENST00000546538 TCL1AP56279 114 aa12.8□□□□□ -0.36
CHERP-204ENST00000546538 TTC32Q5I0X7 151 aa12.8□□□□□ -0.36
CHERP-204ENST00000546538 Q6ZRN7 208 aaPredicted RBP12.8□□□□□ -0.36
CHERP-204ENST00000546538 ZNF680Q8NEM1 530 aa12.8□□□□□ -0.36
CHERP-204ENST00000546538 FUT9Q9Y231 359 aa12.8□□□□□ -0.36
CHERP-204ENST00000546538 PRELID1Q9Y255 219 aa12.8□□□□□ -0.36
CHERP-204ENST00000546538 TRGV2A0A075B6R0 118 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 FAM240BA0A1B0GVZ2 78 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 MPDU1O75352 247 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 FAM122CQ6P4D5 195 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 OR5C1Q8NGR4 320 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 FXYD5Q96DB9 178 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 A0A1W2PPQ1 181 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 Q8TAT8 98 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 PHYHIPLQ96FC7 376 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
CHERP-204ENST00000546538 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
CHERP-204ENST00000546538 LINC00315P59091 139 aa12.78□□□□□ -0.36
CHERP-204ENST00000546538 ASAH1Q13510 395 aa12.78□□□□□ -0.36
CHERP-204ENST00000546538 MRPL16Q9NX20 251 aaKnown RBP12.78□□□□□ -0.36
CHERP-204ENST00000546538 IGHV3-53P01767 116 aa12.77□□□□□ -0.37
CHERP-204ENST00000546538 GPX1P07203 203 aa12.77□□□□□ -0.37
CHERP-204ENST00000546538 NMBP08949 121 aa12.77□□□□□ -0.37
CHERP-204ENST00000546538 OR10J4P0C629 311 aa12.77□□□□□ -0.37
CHERP-204ENST00000546538 NBEAP1P0C6P0 100 aa12.77□□□□□ -0.37
CHERP-204ENST00000546538 IBA57Q5T440 356 aaKnown RBP12.77□□□□□ -0.37
CHERP-204ENST00000546538 LINC00299Q6ZSB3 139 aa12.77□□□□□ -0.37
CHERP-204ENST00000546538 ST6GAL2Q96JF0 529 aa12.77□□□□□ -0.37
CHERP-204ENST00000546538 IFITM3Q01628 133 aa12.76□□□□□ -0.37
CHERP-204ENST00000546538 WDR61Q9GZS3 305 aaKnown RBP12.76□□□□□ -0.37
CHERP-204ENST00000546538 OR51M1Q9H341 326 aa12.76□□□□□ -0.37
CHERP-204ENST00000546538 AAMDCQ9H7C9 122 aa12.76□□□□□ -0.37
CHERP-204ENST00000546538 IGHV1OR15-1A0A075B7D0 117 aa12.75□□□□□ -0.37
CHERP-204ENST00000546538 FUSP35637 526 aaKnown RBP eCLIP12.75□□□□□ -0.37
CHERP-204ENST00000546538 LRRC37A5PQ49AS3 106 aa12.75□□□□□ -0.37
CHERP-204ENST00000546538 Q8N1X5 172 aa12.75□□□□□ -0.37
CHERP-204ENST00000546538 TNFRSF18Q9Y5U5 241 aa12.75□□□□□ -0.37
CHERP-204ENST00000546538 HERC1Q15751 4861 aa12.74□□□□□ -0.37
CHERP-204ENST00000546538 E5RGE8 158 aa12.74□□□□□ -0.37
CHERP-204ENST00000546538 FHL2Q14192 279 aa12.74□□□□□ -0.37
CHERP-204ENST00000546538 TMEM78Q5T7P6 136 aa12.74□□□□□ -0.37
CHERP-204ENST00000546538 PAXXQ9BUH6 204 aa12.74□□□□□ -0.37
CHERP-204ENST00000546538 NMES1Q9C002 83 aa12.74□□□□□ -0.37
CHERP-204ENST00000546538 RGS13O14921 159 aa12.73□□□□□ -0.37
CHERP-204ENST00000546538 EIF3GO75821 320 aaKnown RBP eCLIP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms