RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 KLF17Q5JT82 389 aaPredicted RBP6.22□□□□□ -1.41
UBR1-202ENST00000546274 ZNF474Q6S9Z5 364 aaPredicted RBP6.22□□□□□ -1.41
UBR1-202ENST00000546274 DNAJC30Q96LL9 226 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 C21orf62Q9NYP8 219 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 PGPA6NDG6 321 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 MBD3L4A6NDZ8 208 aaPredicted RBP6.22□□□□□ -1.41
UBR1-202ENST00000546274 MBD3L3A6NE82 208 aaPredicted RBP6.22□□□□□ -1.41
UBR1-202ENST00000546274 MBD3L5A6NJ08 208 aaPredicted RBP6.22□□□□□ -1.41
UBR1-202ENST00000546274 OOSP1A8MZH6 123 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 UPK2O00526 184 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 THBDP07204 575 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 EMP1P54849 157 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 C22orf34Q6ZV56 151 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 MBD3L2Q8NHZ7 208 aaPredicted RBP6.22□□□□□ -1.41
UBR1-202ENST00000546274 PAXXQ9BUH6 204 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 C7orf69Q9H7B7 122 aa6.22□□□□□ -1.41
UBR1-202ENST00000546274 A0A1B0GUT8 65 aa6.21□□□□□ -1.41
UBR1-202ENST00000546274 SMKR1H3BMG3 65 aa6.21□□□□□ -1.41
UBR1-202ENST00000546274 M0R1B8 84 aa6.21□□□□□ -1.41
UBR1-202ENST00000546274 C15orf53Q8NAA6 179 aa6.21□□□□□ -1.41
UBR1-202ENST00000546274 SRSF12Q8WXF0 261 aaKnown RBP6.21□□□□□ -1.41
UBR1-202ENST00000546274 HHLA3Q9XRX5 114 aa6.21□□□□□ -1.41
UBR1-202ENST00000546274 KLK5Q9Y337 293 aaPredicted RBP6.21□□□□□ -1.41
UBR1-202ENST00000546274 TRAV17A0A0B4J275 112 aa6.21□□□□□ -1.42
UBR1-202ENST00000546274 SCGB1C2P0DMR2 95 aa6.21□□□□□ -1.42
UBR1-202ENST00000546274 RNASE2P10153 161 aaKnown RBP6.21□□□□□ -1.42
UBR1-202ENST00000546274 SLC25A48Q6ZT89 311 aaKnown RBP6.21□□□□□ -1.42
UBR1-202ENST00000546274 FAM216BQ8N7L0 139 aa6.21□□□□□ -1.42
UBR1-202ENST00000546274 OR1L4Q8NGR5 311 aa6.21□□□□□ -1.42
UBR1-202ENST00000546274 FOXC2Q99958 501 aa6.21□□□□□ -1.42
UBR1-202ENST00000546274 PRNDQ9UKY0 176 aa6.21□□□□□ -1.42
UBR1-202ENST00000546274 DMXL2Q8TDJ6 3036 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 IGHV3-48P01763 117 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 IGKCP01834 107 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 C2orf83Q53S99 150 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 TMEM78Q5T7P6 136 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 Q71RC1 249 aaPredicted RBP6.2□□□□□ -1.42
UBR1-202ENST00000546274 FAM167A-AS1Q96KT0 104 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 SLC25A2Q9BXI2 301 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 FAM215AQ9Y5M1 114 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 TRAV40A0A0B4J280 105 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 C9JAW5 83 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 E7EUB6 86 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 IGHV1-46P01743 117 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 SAA1P0DJI8 122 aaPredicted RBP6.2□□□□□ -1.42
UBR1-202ENST00000546274 OR10J6PQ8NGY7 276 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 NPIPB3Q92617 1050 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 HIGD1AQ9Y241 93 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 ABCA1O95477 2261 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 WI2-2373I1.2A0A1W2PRP0 233 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 HAX1O00165 279 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 TMEM155Q4W5P6 130 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 AMN1Q8IY45 258 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 LINC01587Q99440 93 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 CCL13Q99616 98 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 RNF7Q9UBF6 113 aa6.2□□□□□ -1.42
UBR1-202ENST00000546274 RPUSD1Q9UJJ7 312 aaKnown RBP6.2□□□□□ -1.42
UBR1-202ENST00000546274 CGB1A6NKQ9 187 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 TCL1BO95988 128 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 RIGQ13278 110 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 HES1Q14469 280 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 ZNF833PQ6ZTB9 187 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 C10orf126Q8N4M7 172 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 PRSS22Q9GZN4 317 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 F5H768 121 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 NPFFO15130 113 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 COX7A2P2O60397 106 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 FSTL3O95633 263 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 HLA-DRB4P13762 266 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 CD69Q07108 199 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 C9orf153Q5TBE3 101 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 DEFB108BQ8NET1 73 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 TMEM158Q8WZ71 300 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 PIMREGQ9BSJ6 248 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 NDUFA4L2Q9NRX3 87 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 HLA-DRB4X5D2U9 266 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 ARFGEF3Q5TH69 2177 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 CNOT1A5YKK6 2376 aaKnown RBP6.19□□□□□ -1.42
UBR1-202ENST00000546274 NAV3Q8IVL0 2385 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 TNFRSF1AP19438 455 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 PDPNQ86YL7 162 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 AAMDCQ9H7C9 122 aa6.19□□□□□ -1.42
UBR1-202ENST00000546274 NDUFA3O95167 84 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 TNFAIP6P98066 277 aaPredicted RBP6.18□□□□□ -1.42
UBR1-202ENST00000546274 TEX36Q5VZQ5 186 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 Q6ZS92 163 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 CITED2Q99967 270 aaPredicted RBP6.18□□□□□ -1.42
UBR1-202ENST00000546274 MRPL20Q9BYC9 149 aaKnown RBP6.18□□□□□ -1.42
UBR1-202ENST00000546274 MGAQ8IWI9 3026 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 MYMXA0A1B0GTQ4 84 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 TMEM213A2RRL7 107 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 DPM2O94777 84 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 ZNF714Q96N38 554 aa6.18□□□□□ -1.42
UBR1-202ENST00000546274 ICE1Q9Y2F5 2266 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 IGKV1D-37A0A075B6S9 117 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 C19orf71A6NCJ1 209 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 WIPF1O43516 503 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 LEPP41159 167 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 ATP5IP56385 69 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms